RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 KLHDC9Q8NEP7 349 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 PIGOQ8TEQ8 1089 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 ATP6V0A1Q93050 837 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 DNAJC19Q96DA6 116 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 GLT1D1Q96MS3 346 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
LINC00539-203ENST00000434601 BCAS3Q9H6U6 928 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.41
LINC00539-203ENST00000434601 SYNRGQ9UMZ2 1314 aa12.52□□□□□ -0.41
LINC00539-203ENST00000434601 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 ARHGEF35A5YM69 484 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 BECN2A8MW95 431 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 GOLGA6L19H0YKK7 550 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 ATG7O95352 703 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 IDEP14735 1019 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 COASYQ13057 564 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 KCNA10Q16322 511 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 LY6KQ17RY6 165 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 CELF3Q5SZQ8 465 aaKnown RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 CCDC62Q6P9F0 684 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 CCDC60Q8IWA6 550 aaPredicted RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 CCDC65Q8IXS2 484 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 KCND2Q9NZV8 630 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 DBR1Q9UK59 544 aaKnown RBP12.51□□□□□ -0.41
LINC00539-203ENST00000434601 GDAQ9Y2T3 454 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
LINC00539-203ENST00000434601 NPHP3-ACAD11A0A0J9YXS1 232 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 BACH1O14867 736 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 IKBKBO14920 756 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 TIMP1P01033 207 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 C6orf222P0C671 652 aaPredicted RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 ITGB8P26012 769 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 MYL5Q02045 173 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 EHHADHQ08426 723 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 RINT1Q6NUQ1 792 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 TAPT1Q6NXT6 567 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 VTI1AQ96AJ9 217 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 COL25A1Q9BXS0 654 aaPredicted RBP12.5□□□□□ -0.41
LINC00539-203ENST00000434601 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 CTNND2Q9UQB3 1225 aa12.5□□□□□ -0.41
LINC00539-203ENST00000434601 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 ZBTB39O15060 712 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 ZNF862O60290 1169 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 FOSL2P15408 326 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 PPP1R2P41236 205 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 RARRES1P49788 294 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 GJA9P57773 515 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 TPM4P67936 248 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 PRKCEQ02156 737 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 RAD51AP2Q09MP3 1159 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 PSMD2Q13200 908 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 PPIGQ13427 754 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 STIM1Q13586 685 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 GIT2Q14161 759 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 C1orf186Q6ZWK4 172 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 KIAA0895Q8NCT3 520 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 UPF3AQ9H1J1 476 aaKnown RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
LINC00539-203ENST00000434601 ZNF302Q9NR11 478 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
LINC00539-203ENST00000434601 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
LINC00539-203ENST00000434601 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
LINC00539-203ENST00000434601 ARVCFO00192 962 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms