RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 UBA5Q9GZZ9 404 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SEMA6BQ9H3T3 888 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PSTPIP2Q9H939 334 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 ARFGAP3Q9NP61 516 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 ZNF446Q9NWS9 450 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 DDX25Q9UHL0 483 aaKnown RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 HERC5Q9UII4 1024 aaKnown RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 FAM184BQ9ULE4 1060 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PCDHA12Q9UN75 941 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SIK3Q9Y2K2 1263 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SLC37A4O43826 429 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 PPP1R11O60927 126 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 ERLIN1O75477 346 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CLSTN1O94985 981 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 TDP2O95551 362 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 IL2RAP01589 272 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CYP3A4P08684 503 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 SREBF1P36956 1147 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 TXKP42681 527 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 MTIF2P46199 727 aaKnown RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 VAV2P52735 878 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CBX1P83916 185 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CKAP4Q07065 602 aaKnown RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 SLC4A8Q2Y0W8 1093 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 ZNF569Q5MCW4 686 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 WDR93Q6P2C0 686 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CCDC65Q8IXS2 484 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 LRRC47Q8N1G4 583 aaKnown RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 SLC35F6Q8N357 371 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 CPLX3Q8WVH0 158 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 COA7Q96BR5 231 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 NOC4LQ9BVI4 516 aaKnown RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 AMNQ9BXJ7 453 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 NDST4Q9H3R1 872 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 SUV39H2Q9H5I1 410 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 DNAJC18Q9H819 358 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 REXO2Q9Y3B8 237 aaKnown RBP8.22□□□□□ -1.09
COL17A1-204ENST00000433822 DAAM1Q9Y4D1 1078 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 LOXHD1Q8IVV2 1947 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 SCN9AQ15858 1988 aa8.22□□□□□ -1.09
COL17A1-204ENST00000433822 TARSL2A2RTX5 802 aaKnown RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CTAGE15A4D2H0 777 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 RASSF10A6NK89 507 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 B4DLN1 442 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 RBAK-RBAKDNI3L0D1 243 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 MAP2K7O14733 419 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 PJA2O43164 708 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 USO1O60763 962 aaKnown RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CTAGE8P0CG41 777 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 SLC1A4P43007 532 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 TNNI2P48788 182 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 HERVK_113P62684 666 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 COASYQ13057 564 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 PICALMQ13492 652 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 MCM6Q14566 821 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 NFIL3Q16649 462 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC96Q2M329 555 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 QRICH1Q2TAL8 776 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CERKLQ49MI3 558 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 FAM26FQ5R3K3 315 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 FKBP1CQ5VVH2 108 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 IQCEQ6IPM2 695 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 TMEM214Q6NUQ4 689 aaKnown RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CTAGE6Q86UF2 777 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 SLC51AQ86UW1 340 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CTAGE4Q8IX94 777 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 TRIM58Q8NG06 486 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 ERMNQ8TAM6 284 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 ANO3Q9BYT9 981 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 DEFB129Q9H1M3 183 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CPVLQ9H3G5 476 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 VAT1LQ9HCJ6 419 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 GOPCQ9HD26 462 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 LZTFL1Q9NQ48 299 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 PRDM10Q9NQV6 1147 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 TMEM260Q9NX78 707 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 MYO6Q9UM54 1294 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 RABGAP1Q9Y3P9 1069 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 HRH3Q9Y5N1 445 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 V9GYY5 206 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-204ENST00000433822 CASP8AP2Q9UKL3 1982 aa8.21□□□□□ -1.1
COL17A1-204ENST00000433822 ADAMTSL1Q8N6G6 1762 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 H0YIN7 160 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 C2CD2LO14523 706 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 MEIS2O14770 477 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 TBC1D8O95759 1140 aa8.2□□□□□ -1.1
COL17A1-204ENST00000433822 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms