RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 EXOC3L4Q17RC7 722 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 HERC4Q5GLZ8 1057 aaPredicted RBP16.07■□□□□ 0.16
DDX56-205ENST00000433257 ALKBH5Q6P6C2 394 aaKnown RBP16.07■□□□□ 0.16
DDX56-205ENST00000433257 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 ZNF526Q8TF50 670 aaPredicted RBP16.07■□□□□ 0.16
DDX56-205ENST00000433257 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
DDX56-205ENST00000433257 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
DDX56-205ENST00000433257 ESYT3A0FGR9 886 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 GSTA1P08263 222 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 UCHL3P15374 230 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 TNNI2P48788 182 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
DDX56-205ENST00000433257 IFT88Q13099 833 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
DDX56-205ENST00000433257 LRRC41Q15345 812 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 SNCBQ16143 134 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 IRF2BP2Q7Z5L9 587 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 GIMAP7Q8NHV1 300 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 CEP95Q96GE4 821 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 NENFQ9UMX5 172 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 ZNF541Q9H0D2 1346 aa16.06■□□□□ 0.16
DDX56-205ENST00000433257 IL1R1P14778 569 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 RFX1P22670 979 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 NR2F2P24468 414 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 ECHS1P30084 290 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 BTDP43251 543 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 DRG2P55039 364 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 PTK2Q05397 1052 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 BYSLQ13895 437 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 NFIL3Q16649 462 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 BMT2Q1RMZ1 405 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 UBLCP1Q8WVY7 318 aaPredicted RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 KCNQ5Q9NR82 932 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 TMEM260Q9NX78 707 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 STXBP5LQ9Y2K9 1186 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 NCANO14594 1321 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 CYP3A7-CYP3A51PA0A087WV96 503 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDX56-205ENST00000433257 PPFIA2O75334 1257 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 NUDT17P0C025 328 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 CYP3A7P24462 503 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 HPDP32754 393 aaPredicted RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 KNOP1Q1ED39 458 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 PREPLQ4J6C6 727 aaPredicted RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 TMC3Q7Z5M5 1100 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 SGSM3Q96HU1 749 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 HES6Q96HZ4 224 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 NSRP1Q9H0G5 558 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 PPANQ9NQ55 473 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
DDX56-205ENST00000433257 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
DDX56-205ENST00000433257 COL4A5P29400 1685 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
DDX56-205ENST00000433257 GAP43P17677 238 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 CYP11B2P19099 503 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 STAT1P42224 750 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 GTF2IP78347 998 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 MRPS25P82663 173 aaKnown RBP16.04■□□□□ 0.16
DDX56-205ENST00000433257 LMNB2Q03252 620 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 ITIH4Q14624 930 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 STRIP1Q5VSL9 837 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 TATDN2Q93075 761 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 TLCD1Q96CP7 247 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 PGM2Q96G03 612 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 SEC16BQ96JE7 1060 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 MBOAT7Q96N66 472 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 CARD9Q9H257 536 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
DDX56-205ENST00000433257 MTMR7Q9Y216 660 aa16.04■□□□□ 0.16
DDX56-205ENST00000433257 UBE4BO95155 1302 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 MYO1FO00160 1098 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 GGPS1O95749 300 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 TTLL1O95922 423 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX56-205ENST00000433257 VIL1P09327 827 aaKnown RBP16.03■□□□□ 0.16
DDX56-205ENST00000433257 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 EZRP15311 586 aaKnown RBP16.03■□□□□ 0.16
DDX56-205ENST00000433257 XRCC4Q13426 336 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 KRT71Q3SY84 523 aa16.03■□□□□ 0.16
DDX56-205ENST00000433257 WLSQ5T9L3 541 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms