RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 PPP1R16BQ96T49 567 aa15.99■□□□□ 0.15
CSNK1E-209ENST00000431632 IFIH1Q9BYX4 1025 aaKnown RBP15.99■□□□□ 0.15
CSNK1E-209ENST00000431632 TUFT1Q9NNX1 390 aa15.99■□□□□ 0.15
CSNK1E-209ENST00000431632 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
CSNK1E-209ENST00000431632 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
CSNK1E-209ENST00000431632 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 XRCC6P12956 609 aaKnown RBP eCLIP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 ATP2A2P16615 1042 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 RPA1P27694 616 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 CD52P31358 61 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 WDR5P61964 334 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 ECM1Q16610 540 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 EVPLQ92817 2033 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 ZNF668Q96K58 619 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 MAP7D2Q96T17 732 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 DHX33Q9H6R0 707 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 ANKEF1Q9NU02 776 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 SQORQ9Y6N5 450 aa15.98■□□□□ 0.15
CSNK1E-209ENST00000431632 PP2D1A8MPX8 630 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 EFCAB14O75071 495 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 CDC25AP30304 524 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 PBX2P40425 430 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 RFC5P40937 340 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 KCNJ6P48051 423 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 DNM2P50570 870 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 RABGGTBP53611 331 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 DEFB103AP81534 67 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 SF3A1Q15459 793 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 ARL6IP4Q66PJ3 421 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 TSHZ1Q6ZSZ6 1077 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 TMEM40Q8WWA1 233 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 RAB34Q9BZG1 259 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 SUCLA2Q9P2R7 463 aaPredicted RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 PADI3Q9ULW8 664 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 NOC2LQ9Y3T9 749 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
CSNK1E-209ENST00000431632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 ENPP3O14638 875 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 POLGP54098 1239 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 GPR153Q6NV75 609 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 POTEGQ6S5H5 508 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 TMCO2Q7Z6W1 182 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 SLC7A3Q8WY07 619 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 APBB2Q92870 758 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 TMEM143Q96AN5 459 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 NACC1Q96RE7 527 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 OSMRQ99650 979 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 JPH2Q9BR39 696 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 PBX4Q9BYU1 374 aa15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-209ENST00000431632 RPS6KA5O75582 802 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 RARRES1P49788 294 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 GPC3P51654 580 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 RTN4RL1Q86UN2 441 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 HERC6Q8IVU3 1022 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 ZNF710Q8N1W2 664 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 SNX29Q8TEQ0 813 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 PRPF31Q8WWY3 499 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 SLC9A7Q96T83 725 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 MMTAG2Q9BU76 263 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 BMP2KQ9NSY1 1161 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 KIAA1024Q9UPX6 916 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 STK24Q9Y6E0 443 aa15.95■□□□□ 0.14
CSNK1E-209ENST00000431632 BMP15O95972 392 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 PDIA4P13667 645 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 MYOGP15173 224 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 MUTP22033 750 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 DNAJB2P25686 324 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 CDC42EP1Q00587 391 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 CEBPZQ03701 1054 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 NFX1Q12986 1120 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 PAK2Q13177 524 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 EMC2Q15006 297 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 PTPAQ15257 358 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 KRT79Q5XKE5 535 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 HAUS3Q68CZ6 603 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 Q7L0L9 218 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 RHPN2Q8IUC4 686 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 NLRP7Q8WX94 980 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 TMX1Q9H3N1 280 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 ERVK-5Q9HDB9 667 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 XPNPEP1Q9NQW7 623 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 MSRAQ9UJ68 235 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 YBX2Q9Y2T7 364 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-209ENST00000431632 CHD9Q3L8U1 2897 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms