RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CCDC106Q9BWC9 280 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 ZFP57Q9NU63 452 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 GMIPQ9P107 970 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SIRPGQ9P1W8 387 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 GIMAP2Q9UG22 337 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 RBMX2Q9Y388 322 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TIMM22Q9Y584 194 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 A0A1W2PQ67 120 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CTAGE15A4D2H0 777 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PRR23AA6NEV1 266 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SOWAHDA6NJG2 315 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 FOXO6A8MYZ6 492 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 RSPH10B2B2RC85 870 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TREHO43280 583 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CYP17A1P05093 508 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 FESP07332 822 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 KRT16P08779 473 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TFPTP0C1Z6 253 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 RSPH10BP0C881 870 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CTAGE8P0CG41 777 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 IL32P24001 234 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 MSLNQ13421 630 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PON2Q15165 354 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SPATS1Q496A3 300 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 ALG1LQ6GMV1 187 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 B3GNT6Q6ZMB0 384 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CTAGE6Q86UF2 777 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CTAGE4Q8IX94 777 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TEX9Q8N6V9 391 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 LRRC8CQ8TDW0 803 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 KCNN1Q92952 543 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 MTFMTQ96DP5 389 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF594Q96JF6 807 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CALN1Q9BXU9 219 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 THAP9Q9H5L6 903 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 HSPBP1Q9NZL4 362 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 NFKBIL1Q9UBC1 381 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SPATA2Q9UM82 520 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PCDHGC5Q9Y5F6 944 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 MTUS2Q5JR59 1369 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 ZSCAN5BA6NJL1 495 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 YKT6O15498 198 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SULT1B1O43704 296 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 LTA4HP09960 611 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 AARSP49588 968 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 MRPL12P52815 198 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 CASP8Q14790 479 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 HADHQ16836 314 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 TMEM95Q3KNT9 176 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SNRNP48Q6IEG0 339 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PLPP7Q8NBV4 271 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 KCTD4Q8WVF5 259 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 SNX27Q96L92 541 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 PHF12Q96QT6 1004 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 GMLQ99445 158 aa5.77□□□□□ -1.49
PTPN4-203ENST00000430976 GPHNQ9NQX3 736 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 RRP7AQ9Y3A4 280 aaKnown RBP5.77□□□□□ -1.49
PTPN4-203ENST00000430976 A0A0G2JPF8 293 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 HNRNPCL3B7ZW38 293 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SMAD9O15198 467 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 S100A9P06702 114 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 HNRNPCL4P0DMR1 293 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ATF6P18850 670 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 KCNJ6P48051 423 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SMARCA4P51532 1647 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF445P59923 1031 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 VBP1P61758 197 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TUBA4AP68366 448 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 NR1D2Q14995 579 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 Q3ZCU0 254 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ERICH5Q6P6B1 374 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 BORAQ6PGQ7 559 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CNSTQ6PJW8 725 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SLC22A25Q6T423 547 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SLC9B2Q86UD5 537 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 VSIG1Q86XK7 387 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CLVS1Q8IUQ0 354 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 SRRM1Q8IYB3 904 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF321PQ8N8H1 164 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ANKS4BQ8N8V4 417 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 HSPH1Q92598 858 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM43Q96BQ3 446 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TBC1D32Q96NH3 1257 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 TSGA13Q96PP4 275 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 REPIN1Q9BWE0 567 aaKnown RBP5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF510Q9Y2H8 683 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 WDR19Q8NEZ3 1342 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 CCDC160A6NGH7 325 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 GOLGA8KD6RF30 607 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 ZBTB14O43829 449 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 DNAJB6O75190 326 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 LRRN2O75325 713 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 F2P00734 622 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PYGMP11217 842 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 MYL4P12829 197 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 EDN3P14138 238 aa5.76□□□□□ -1.49
PTPN4-203ENST00000430976 PPARGP37231 505 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms