RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 DBR1Q9UK59 544 aaKnown RBP13.89□□□□□ -0.19
USP40-205ENST00000430158 CFAP45Q9UL16 551 aa13.89□□□□□ -0.19
USP40-205ENST00000430158 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
USP40-205ENST00000430158 NR2E3Q9Y5X4 410 aa13.89□□□□□ -0.19
USP40-205ENST00000430158 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
USP40-205ENST00000430158 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 MAGEB2O15479 319 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 MAFO75444 373 aaPredicted RBP13.88□□□□□ -0.19
USP40-205ENST00000430158 CKBP12277 381 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 SYN1P17600 705 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 CYP2C18P33260 490 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 RARRES1P49788 294 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 MGAT3Q09327 533 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 KRT79Q5XKE5 535 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 NACC1Q96RE7 527 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 OSBPL7Q9BZF2 842 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 XPNPEP1Q9NQW7 623 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 BLOC1S4Q9NUP1 217 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
USP40-205ENST00000430158 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 PPME1Q9Y570 386 aa13.88□□□□□ -0.19
USP40-205ENST00000430158 A0A087X0B3 334 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 CAND2O75155 1236 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 CHRNA1P02708 482 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 DRP2Q13474 957 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 MFSD5Q6N075 450 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 SHC4Q6S5L8 630 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 OTUD6AQ7L8S5 288 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 CABP7Q86V35 215 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 KCTD17Q8N5Z5 321 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 DNAJB3Q8WWF6 145 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
USP40-205ENST00000430158 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 PRO3102Q9H379 93 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
USP40-205ENST00000430158 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
USP40-205ENST00000430158 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 ATP6V1DQ9Y5K8 247 aa13.87□□□□□ -0.19
USP40-205ENST00000430158 E9PMD0 336 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 CUTAO60888 179 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 EYA4O95677 639 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 IQCF3P0C7M6 154 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 SELPP16109 830 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 EPHB4P54760 987 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 KRT85P78386 507 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 BFSP2Q13515 415 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 NAALADL2Q58DX5 795 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 XKR9Q5GH70 373 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 EFCAB12Q6NXP0 572 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 BADQ92934 168 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 GDF15Q99988 308 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 NOD1Q9Y239 953 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 KDM3AQ9Y4C1 1321 aa13.86□□□□□ -0.19
USP40-205ENST00000430158 NBNO60934 754 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 GPR32O75388 356 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 CXCL10P02778 98 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 RAG1P15918 1043 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 THPOP40225 353 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 RFC5P40937 340 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 UBA7P41226 1012 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
USP40-205ENST00000430158 CLCN3P51790 818 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 CCL23P55773 120 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 TBC1D8BQ0IIM8 1120 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
USP40-205ENST00000430158 LRRC8DQ7L1W4 858 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 NME8Q8N427 588 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 LRRC71Q8N4P6 559 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 SCLYQ96I15 445 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 PLIN2Q99541 437 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
USP40-205ENST00000430158 ADAMTS10Q9H324 1103 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 CDHR5Q9HBB8 845 aa13.85□□□□□ -0.19
USP40-205ENST00000430158 MYH11P35749 1972 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 FAM237AA0A1B0GTK4 181 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 CYP11B2P19099 503 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 PLCG1P19174 1290 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 SLC12A3P55017 1021 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
USP40-205ENST00000430158 EMC2Q15006 297 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 E2F4Q16254 413 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 TCTN1Q2MV58 587 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 RESP18Q5W5W9 173 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 C1orf186Q6ZWK4 172 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
USP40-205ENST00000430158 FAM49AQ9H0Q0 323 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms