RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ELMSAN1Q6PJG2 1045 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 KIAA1586Q9HCI6 787 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 NLRC4Q9NPP4 1024 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 CCNE1P24864 410 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 ACTR2P61160 394 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 MOXD1Q6UVY6 613 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 C7orf43Q8WVR3 580 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 PPP1R9BQ96SB3 815 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 SELENOOQ9BVL4 669 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 MSH4O15457 936 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 KPNA6O60684 536 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 RFX1P22670 979 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 PGM5Q15124 567 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 SLC30A10Q6XR72 485 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 RNF149Q8NC42 400 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
PTCH1-207ENST00000429896 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-207ENST00000429896 SLC15A5A6NIM6 579 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 PTGER2P43116 358 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 EXOC3L4Q17RC7 722 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 TREML2Q5T2D2 321 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 VTA1Q9NP79 307 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 CSPG5O95196 566 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 SLURP2P0DP57 97 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 CYP2C9P11712 490 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-207ENST00000429896 EMC2Q15006 297 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 PPP1R21Q6ZMI0 780 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 MICAL1Q8TDZ2 1067 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 BTAF1O14981 1849 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 STAT1P42224 750 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 PDE6CP51160 858 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 DSTYKQ6XUX3 929 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 FBXO2Q9UK22 296 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-207ENST00000429896 OATP04181 439 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 TAL1P17542 331 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-207ENST00000429896 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 FANCLQ9NW38 375 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 AKR1A1P14550 325 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 ZNF75DP51815 510 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 FBXL16Q8N461 479 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 MAK16Q9BXY0 300 aaKnown RBP14.04□□□□□ -0.16
PTCH1-207ENST00000429896 GUCA1BQ9UMX6 200 aa14.04□□□□□ -0.16
PTCH1-207ENST00000429896 LRRC63Q05C16 580 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 MUM1L1Q5H9M0 696 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 DCUN1D2Q6PH85 259 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 LAMB4A4D0S4 1761 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 DCDC2CA8MYV0 355 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 EEF1GP26641 437 aaKnown RBP14.03□□□□□ -0.16
PTCH1-207ENST00000429896 ARPP19P56211 112 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 SPECC1LQ69YQ0 1117 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 KCNK9Q9NPC2 374 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 GDAQ9Y2T3 454 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 ATP8B3O60423 1300 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 CKAP4Q07065 602 aaKnown RBP14.03□□□□□ -0.16
PTCH1-207ENST00000429896 KYAT1Q16773 422 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 POLD4Q9HCU8 107 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 HMX1Q9NP08 348 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-207ENST00000429896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCH1-207ENST00000429896 RHOXF2BP0C7M4 288 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 TMEM143Q96AN5 459 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 RHOXF2Q9BQY4 288 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 TLDC2A0PJX2 215 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 TUBGCP2Q9BSJ2 902 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 RSPH14Q9UHP6 348 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
PTCH1-207ENST00000429896 PCDHB4Q9Y5E5 795 aa14.03□□□□□ -0.16
PTCH1-207ENST00000429896 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.16
PTCH1-207ENST00000429896 HGSO14964 777 aaPredicted RBP14.02□□□□□ -0.16
PTCH1-207ENST00000429896 ASAP2O43150 1006 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 ADCY3O60266 1144 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 ABHD16BQ9H3Z7 469 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 KCND2Q9NZV8 630 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 ODF2LQ9ULJ1 636 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 PRKCBP05771 671 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 BFSP1Q12934 665 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 Q4G0T1 1027 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 GPR142Q7Z601 462 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 MIS12Q9H081 205 aa14.02□□□□□ -0.16
PTCH1-207ENST00000429896 SMIM22K7EJ46 135 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 ABL1P00519 1130 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTCH1-207ENST00000429896 IFRD2Q12894 506 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-207ENST00000429896 THAP9Q9H5L6 903 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 TBC1D8O95759 1140 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 COPB1P53618 953 aaKnown RBP14.02□□□□□ -0.17
PTCH1-207ENST00000429896 DGKZQ13574 1117 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTCH1-207ENST00000429896 EEF2KMTQ96G04 330 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms