RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
ATG4B-210ENST00000428861 SUGCTQ9HAC7 445 aa12.06□□□□□ -0.48
ATG4B-210ENST00000428861 PADI3Q9ULW8 664 aa12.06□□□□□ -0.48
ATG4B-210ENST00000428861 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
ATG4B-210ENST00000428861 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
ATG4B-210ENST00000428861 PCDHB6Q9Y5E3 794 aa12.06□□□□□ -0.48
ATG4B-210ENST00000428861 RFXAPO00287 272 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 ENPP3O14638 875 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 MAGEB2O15479 319 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 TLL1O43897 1013 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 MGEA5O60502 916 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 EFCAB14O75071 495 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
ATG4B-210ENST00000428861 TAP1Q03518 808 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 TBC1D8BQ0IIM8 1120 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 ADGRE1Q14246 886 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 C4orf19Q8IY42 314 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 APBB2Q92870 758 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 PRDM12Q9H4Q4 367 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 ERVK-5Q9HDB9 667 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 STXBP5LQ9Y2K9 1186 aa12.05□□□□□ -0.48
ATG4B-210ENST00000428861 M0QZ92 97 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 MAFO75444 373 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 UPP2O95045 317 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 AMHP03971 560 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 OR52Z1P0C646 297 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 SPATA31C1P0DKV0 1188 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 YWHABP31946 246 aaKnown RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 TECP42680 631 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 TRAPPC10P48553 1259 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 GPC3P51654 580 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 NLRP11P59045 1033 aaKnown RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 HTRA4P83105 476 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 IL17AQ16552 155 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 FAM228AQ86W67 206 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 RAD9AQ99638 391 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 CYP26B1Q9NR63 512 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-210ENST00000428861 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 SQORQ9Y6N5 450 aa12.04□□□□□ -0.48
ATG4B-210ENST00000428861 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 MED24O75448 989 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 CRYBB1P53674 252 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 PAK2Q13177 524 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 ECM1Q16610 540 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 CRIPAKQ8N1N5 446 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 CEP170P1Q96L14 293 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 DHX33Q9H6R0 707 aaKnown RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-210ENST00000428861 MYO9BQ13459 2157 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
ATG4B-210ENST00000428861 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.48
ATG4B-210ENST00000428861 LINC01553A4QN01 128 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 H3BQV1 296 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 RPS6KA5O75582 802 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 LYPLA2O95372 231 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 FGFR4P22455 802 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 TMOD1P28289 359 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 PTGDRQ13258 359 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 CATSPER3Q86XQ3 398 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 USP38Q8NB14 1042 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 PIGOQ8TEQ8 1089 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 TMEM143Q96AN5 459 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 RC3H2Q9HBD1 1191 aaKnown RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 XPNPEP1Q9NQW7 623 aa12.02□□□□□ -0.49
ATG4B-210ENST00000428861 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.49
ATG4B-210ENST00000428861 A0A087WZ62 844 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-210ENST00000428861 LPXNO60711 386 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 LINC00271P0C7V0 271 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 DARSP14868 501 aaKnown RBP12.01□□□□□ -0.49
ATG4B-210ENST00000428861 FOSL2P15408 326 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
ATG4B-210ENST00000428861 GATMP50440 423 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 DSC3Q14574 896 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
ATG4B-210ENST00000428861 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms