RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PUF60Q9UHX1 559 aaKnown RBP20.82■□□□□ 0.92
UPK3BP1-201ENST00000428678 SMCO2A6NFE2 343 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZBTB42B2RXF5 422 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 VTNP04004 478 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 CRYBB1P53674 252 aaPredicted RBP20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 AP3B2Q13367 1082 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 RTN1Q16799 776 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 LLGL2Q6P1M3 1020 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 NIPA1Q7RTP0 329 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 TRMT1LQ7Z2T5 733 aaKnown RBP20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZBTB33Q86T24 672 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 PLA2G4DQ86XP0 818 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 METTL13Q8N6R0 699 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 TCF25Q9BQ70 676 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 LZTS1Q9Y250 596 aa20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 V9GY48 417 aaPredicted RBP20.81■□□□□ 0.92
UPK3BP1-201ENST00000428678 C22orf31O95567 290 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 SP100P23497 879 aaPredicted RBP20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 VCPP55072 806 aaKnown RBP20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 PTPN21Q16825 1174 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 ANKRD54Q6NXT1 300 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 MRPS27Q92552 414 aaKnown RBP20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 ASIC4Q96FT7 647 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 ESYT1Q9BSJ8 1104 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 GLT8D2Q9H1C3 349 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 ANO2Q9NQ90 1003 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 SPTBN4Q9H254 2564 aa20.8■□□□□ 0.92
UPK3BP1-201ENST00000428678 PTPRZ1P23471 2315 aaPredicted RBP20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 FAM86B1E9PN63 330 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 hCG_1984214I3L0E3 225 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 IPO5O00410 1097 aaKnown RBP20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 FAM86B2P0C5J1 330 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 ATP4AP20648 1035 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 FAM189BP81408 668 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 FUT2Q10981 343 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 JAKMIP3Q5VZ66 844 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZNF713Q8N859 430 aaPredicted RBP20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 TMEM117Q9H0C3 514 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 S1PR5Q9H228 398 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 ELAC1Q9H777 363 aaKnown RBP20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 FAM86C1Q9NVL1 165 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 BARHL2Q9NY43 387 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 TCEAL9Q9UHQ7 104 aa20.79■□□□□ 0.92
UPK3BP1-201ENST00000428678 HIDE1A8MVS5 230 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 DHX15O43143 795 aaKnown RBP20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZBTB43O43298 467 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 HOXA2O43364 376 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 GPR32O75388 356 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 PBX3P40426 434 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 CLK2P49760 499 aaKnown RBP20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 PLCB3Q01970 1234 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 KCNC3Q14003 757 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 DSC3Q14574 896 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 SYCE2Q6PIF2 218 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 TMEM184AQ6ZMB5 413 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 ABI1Q8IZP0 508 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 RASGRP4Q8TDF6 673 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 BBXQ8WY36 941 aaPredicted RBP20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZNF558Q96NG5 402 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 NGRNQ9NPE2 291 aaKnown RBP20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 RIF1Q5UIP0 2472 aaKnown RBP20.78■□□□□ 0.92
UPK3BP1-201ENST00000428678 ST18O60284 1047 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 PPM1AP35813 382 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 CLCN3P51790 818 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 KCNT2Q6UVM3 1135 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 LRRC55Q6ZSA7 311 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 TMC7Q7Z402 723 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 RNF169Q8NCN4 708 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 TCEANC2Q96MN5 208 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 CASD1Q96PB1 797 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 ZNF577Q9BSK1 485 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 BRPF3Q9ULD4 1205 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 AKT3Q9Y243 479 aa20.77■□□□□ 0.92
UPK3BP1-201ENST00000428678 MYO10Q9HD67 2058 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 IGLV3-22A0A075B6J6 115 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 GOLGA8AA7E2F4 631 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 HOXB8P17481 243 aaPredicted RBP20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 AVPR2P30518 371 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 KRT17Q04695 432 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 ZNF746Q6NUN9 644 aaPredicted RBP20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 LRRC43Q8N309 656 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 RNF19AQ9NV58 838 aa20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 MAFBQ9Y5Q3 323 aaPredicted RBP20.76■□□□□ 0.91
UPK3BP1-201ENST00000428678 GFRA3O60609 400 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 PSAPP07602 524 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 NLRP11P59045 1033 aaKnown RBP20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 RNF20Q5VTR2 975 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 ATOH1Q92858 354 aaPredicted RBP20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 MAP7D2Q96T17 732 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 TBC1D22BQ9NU19 505 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 SPG21Q9NZD8 308 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 GABBR1Q9UBS5 961 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 CDH22Q9UJ99 828 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 NAP1L2Q9ULW6 460 aaPredicted RBP20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 CEP131Q9UPN4 1083 aa20.75■□□□□ 0.91
UPK3BP1-201ENST00000428678 NR2E1Q9Y466 385 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms