RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ACVR2BQ13705 512 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 TARBP2Q15633 366 aaKnown RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 KNOP1Q1ED39 458 aaKnown RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 DAW1Q8N136 415 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 SLC7A3Q8WY07 619 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 FIZ1Q96SL8 496 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 KCTD10Q9H3F6 313 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 TMEM206Q9H813 350 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 MRPL44Q9H9J2 332 aaKnown RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 SAGE1Q9NXZ1 904 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 GJD2Q9UKL4 321 aa10.02□□□□□ -0.81
NR1I3-209ENST00000428574 ZNF215Q9UL58 517 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-209ENST00000428574 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 CALUO43852 315 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 HBP1O60381 514 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 HIP1RO75146 1068 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ARIH2O95376 493 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 YY1P25490 414 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 UBASH3AP57075 661 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ENPEPQ07075 957 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 DMP1Q13316 513 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 KIF22Q14807 665 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ARHGEF6Q15052 776 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 HSDL1Q3SXM5 330 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ANKRD40Q6AI12 368 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 CYP4F22Q6NT55 531 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 LRRC55Q6ZSA7 311 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 C12orf56Q8IXR9 622 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 NPLOC4Q8TAT6 608 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 PCYT2Q99447 389 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 MKNK1Q9BUB5 465 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 SAMSN1Q9NSI8 373 aaKnown RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-209ENST00000428574 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
NR1I3-209ENST00000428574 ZNFX1Q9P2E3 1918 aaKnown RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 NPHP3-ACAD11A0A0J9YXS1 232 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 A0A1W2PQC6 194 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 KCNJ18B7U540 433 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 ZBTB39O15060 712 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 MAPK13O15264 365 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 GCNT3O95395 438 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 ATP1A3P13637 1013 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 ATP4AP20648 1035 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 NAMPTP43490 491 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 PRMT2P55345 433 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 NKX3-2P78367 333 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 GTF2BQ00403 316 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 POU5F1BQ06416 359 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 TRIM14Q14142 442 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 KCNJ12Q14500 433 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 BRDTQ58F21 947 aaPredicted RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 ZNF484Q5JVG2 852 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 UTP14CQ5TAP6 766 aaKnown RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 APTXQ7Z2E3 356 aaKnown RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 TCP11Q8WWU5 503 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 IFT74Q96LB3 600 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 CEP89Q96ST8 783 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 XPO4Q9C0E2 1151 aaKnown RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 METTL14Q9HCE5 456 aaKnown RBP10□□□□□ -0.81
NR1I3-209ENST00000428574 IFNKQ9P0W0 207 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 FAM184BQ9ULE4 1060 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 CASP8AP2Q9UKL3 1982 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 ARID2Q68CP9 1835 aa10□□□□□ -0.81
NR1I3-209ENST00000428574 IGKV6-21A0A0C4DH24 114 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 A6NJR5 290 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 LGALS16A8MUM7 142 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 KIAA0391O15091 583 aaKnown RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 CETN3O15182 167 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MAGEB2O15479 319 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 KPNA6O60684 536 aa9.99□□□□□ -0.81
NR1I3-209ENST00000428574 MAFO75444 373 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-209ENST00000428574 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms