RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 TMEM206Q9H813 350 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 SIX2Q9NPC8 291 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 LARSQ9P2J5 1176 aaKnown RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 NAGPAQ9UK23 515 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 NENFQ9UMX5 172 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 MYH11P35749 1972 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 NMT1P30419 496 aaKnown RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 TNNT3P45378 269 aaPredicted RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 CASP4P49662 377 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 NNTQ13423 1086 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 ODR4Q5SWX8 454 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 PCNX4Q63HM2 1172 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 MIER3Q7Z3K6 550 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 ZNF571Q7Z3V5 609 aaPredicted RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 AENQ8WTP8 325 aaKnown RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 TAF4BQ92750 862 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 CCDC102AQ96A19 550 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 CALR3Q96L12 384 aaKnown RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 STK33Q9BYT3 514 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 KIAA1683Q9H0B3 1180 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 SUGCTQ9HAC7 445 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 ZCCHC17Q9NP64 241 aaKnown RBP21.97■■□□□ 1.11
PMPCB-202ENST00000428154 TBC1D22BQ9NU19 505 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 STIM2Q9P246 746 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 HPCAL4Q9UM19 191 aa21.97■■□□□ 1.11
PMPCB-202ENST00000428154 CLIC2O15247 247 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 PPP1R37O75864 691 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 ACTN1P12814 892 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 EPHB4P54760 987 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 ARID5AQ03989 594 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 ALKBH5Q6P6C2 394 aaKnown RBP21.96■■□□□ 1.11
PMPCB-202ENST00000428154 C12orf56Q8IXR9 622 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 AGPAT3Q9NRZ7 376 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 CALCOCO1Q9P1Z2 691 aa21.96■■□□□ 1.11
PMPCB-202ENST00000428154 P4HA2O15460 535 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 N4BP1O75113 896 aaKnown RBP21.95■■□□□ 1.1
PMPCB-202ENST00000428154 LMNB1P20700 586 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 FMO5P49326 533 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 C8orf74Q6P047 294 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 SYCE1Q8N0S2 351 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.95■■□□□ 1.1
PMPCB-202ENST00000428154 IWS1Q96ST2 819 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 SELENOOQ9BVL4 669 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 ZBTB12Q9Y330 459 aaPredicted RBP21.95■■□□□ 1.1
PMPCB-202ENST00000428154 UBIAD1Q9Y5Z9 338 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 ZNF536O15090 1300 aa21.95■■□□□ 1.1
PMPCB-202ENST00000428154 MAPK13O15264 365 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 H2AFZP0C0S5 128 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 H2AFVQ71UI9 128 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 IFT20Q8IY31 132 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 GOLGA6L1Q8N7Z2 621 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 EIF1ADQ8N9N8 165 aaKnown RBP21.94■■□□□ 1.1
PMPCB-202ENST00000428154 LRRC1Q9BTT6 524 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 ST6GALNAC4Q9H4F1 302 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 RNF216Q9NWF9 866 aaPredicted RBP21.94■■□□□ 1.1
PMPCB-202ENST00000428154 VPS18Q9P253 973 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 ZHX1Q9UKY1 873 aaPredicted RBP21.94■■□□□ 1.1
PMPCB-202ENST00000428154 SFI1A8K8P3 1242 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 WNT10BO00744 389 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 KCNA3P22001 575 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
PMPCB-202ENST00000428154 RPS6KA1Q15418 735 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 CIAPIN1Q6FI81 312 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 XRRA1Q6P2D8 792 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 MIGA2Q7L4E1 593 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 ZNF341Q9BYN7 854 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 KCNH7Q9NS40 1196 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 FBXO28Q9NVF7 368 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 COL4A5P29400 1685 aa21.94■■□□□ 1.1
PMPCB-202ENST00000428154 NCK2O43639 380 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 ITGB5P18084 799 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 SOX5P35711 763 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 TNNC1P63316 161 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 APBA1Q02410 837 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 EN1Q05925 392 aaPredicted RBP21.93■■□□□ 1.1
PMPCB-202ENST00000428154 KCNA1Q09470 495 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 CETN1Q12798 172 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 ZYXQ15942 572 aaKnown RBP21.93■■□□□ 1.1
PMPCB-202ENST00000428154 PADI6Q6TGC4 694 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 SYCP3Q8IZU3 236 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
PMPCB-202ENST00000428154 CLEC4DQ8WXI8 215 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 CAVIN3Q969G5 261 aa21.93■■□□□ 1.1
PMPCB-202ENST00000428154 PHF20L1A8MW92 1017 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 CTNND1O60716 968 aaKnown RBP21.92■■□□□ 1.1
PMPCB-202ENST00000428154 HIP1RO75146 1068 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 KRT13P13646 458 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 DPEP1P16444 411 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 RPS12P25398 132 aaKnown RBP21.92■■□□□ 1.1
PMPCB-202ENST00000428154 UBXN2AP68543 259 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 INTS8Q75QN2 995 aaKnown RBP21.92■■□□□ 1.1
PMPCB-202ENST00000428154 HOOK2Q96ED9 719 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 INPP4AQ96PE3 977 aaPredicted RBP21.92■■□□□ 1.1
PMPCB-202ENST00000428154 MAF1Q9H063 256 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 SLC38A10Q9HBR0 1119 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 AGO4Q9HCK5 861 aaKnown RBP21.92■■□□□ 1.1
PMPCB-202ENST00000428154 MYOZ2Q9NPC6 264 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 INPP5BP32019 993 aa21.92■■□□□ 1.1
PMPCB-202ENST00000428154 CXCR5P32302 372 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms