RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MYO7AQ13402 2215 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 TMEM150BA6NC51 233 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 FAM205CA6NFA0 338 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 MAGEB2O15479 319 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 PAN2Q504Q3 1202 aaKnown RBP20.73■□□□□ 0.91
PSPC1-202ENST00000427943 EARS2Q5JPH6 523 aaKnown RBP20.73■□□□□ 0.91
PSPC1-202ENST00000427943 B3GNT9Q6UX72 402 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 FAM228AQ86W67 206 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 LINC01465Q8N7H1 131 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 RDM1Q8NG50 284 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 WASF1Q92558 559 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 HLA-CQ95604 372 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 MRPL38Q96DV4 380 aaKnown RBP20.73■□□□□ 0.91
PSPC1-202ENST00000427943 ZNF668Q96K58 619 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-202ENST00000427943 NRBP2Q9NSY0 501 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 ST3GAL5Q9UNP4 418 aa20.73■□□□□ 0.91
PSPC1-202ENST00000427943 JAK2O60674 1132 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 GPR32O75388 356 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 STAG3L1P0CL83 205 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 GATMP50440 423 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 CRYBB1P53674 252 aaPredicted RBP20.72■□□□□ 0.91
PSPC1-202ENST00000427943 NR5A1Q13285 461 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 PTPROQ16827 1216 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 AAK1Q2M2I8 961 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 MTERF2Q49AM1 385 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 CRIPAKQ8N1N5 446 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 BANK1Q8NDB2 785 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 NSUN7Q8NE18 718 aaKnown RBP20.72■□□□□ 0.91
PSPC1-202ENST00000427943 MAP7D2Q96T17 732 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 SH2D3AQ9BRG2 576 aa20.72■□□□□ 0.91
PSPC1-202ENST00000427943 DENND3A2RUS2 1198 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 CCNT1O60563 726 aaKnown RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 CSPG5O95196 566 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 BMP1P13497 986 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 SARSP49591 514 aaKnown RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 NLRP11P59045 1033 aaKnown RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 TBC1D8BQ0IIM8 1120 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 NECAB3Q96P71 396 aaPredicted RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 UHRF1Q96T88 793 aaPredicted RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 ADAM2Q99965 735 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 LRFN2Q9ULH4 789 aa20.71■□□□□ 0.91
PSPC1-202ENST00000427943 MRPL42Q9Y6G3 142 aaKnown RBP20.71■□□□□ 0.91
PSPC1-202ENST00000427943 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 EML1O00423 815 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 GPR182O15218 404 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 GCFC2P16383 781 aaKnown RBP20.7■□□□□ 0.9
PSPC1-202ENST00000427943 TMOD1P28289 359 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 KRT2P35908 639 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 BMPR1AP36894 532 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 ST3GAL1Q11201 340 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 TARBP2Q15633 366 aaKnown RBP20.7■□□□□ 0.9
PSPC1-202ENST00000427943 ODR4Q5SWX8 454 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 POTEDQ86YR6 584 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 CMTR2Q8IYT2 770 aaKnown RBP20.7■□□□□ 0.9
PSPC1-202ENST00000427943 CLP1Q92989 425 aaKnown RBP20.7■□□□□ 0.9
PSPC1-202ENST00000427943 KCNMB3Q9NPA1 279 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 RWDD3Q9Y3V2 267 aa20.7■□□□□ 0.9
PSPC1-202ENST00000427943 TNFRSF10AO00220 468 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 GRM6O15303 877 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 STBD1O95210 358 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 DRP2Q13474 957 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 TIGD5Q53EQ6 642 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 XKR3Q5GH77 459 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 PPP4R3AQ6IN85 833 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 SCLT1Q96NL6 688 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 C11orf84Q9BUA3 381 aaPredicted RBP20.69■□□□□ 0.9
PSPC1-202ENST00000427943 ADAMTS10Q9H324 1103 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 UBE2ZQ9H832 354 aaPredicted RBP20.69■□□□□ 0.9
PSPC1-202ENST00000427943 BRMS1Q9HCU9 246 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 RGS18Q9NS28 235 aa20.69■□□□□ 0.9
PSPC1-202ENST00000427943 RB1P06400 928 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 GPC3P51654 580 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 PPP2R5CQ13362 524 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 TCEAL5Q5H9L2 206 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 PLA2G4FQ68DD2 849 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 HAS1Q92839 578 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 TNFRSF25Q93038 417 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 FAM20AQ96MK3 541 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 NIFKQ9BYG3 293 aaKnown RBP20.68■□□□□ 0.9
PSPC1-202ENST00000427943 C1orf112Q9NSG2 853 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 PCDHB7Q9Y5E2 793 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 NCOR1O75376 2440 aa20.68■□□□□ 0.9
PSPC1-202ENST00000427943 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 C9IYK1 514 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 FGFR4P22455 802 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 PSMC5P62195 406 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 SLC24A5Q71RS6 500 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 CEP89Q96ST8 783 aa20.67■□□□□ 0.9
PSPC1-202ENST00000427943 NAP1L4Q99733 375 aaKnown RBP20.67■□□□□ 0.9
PSPC1-202ENST00000427943 ALG13Q9NP73 1137 aaKnown RBP20.67■□□□□ 0.9
PSPC1-202ENST00000427943 MUC3AQ02505 3323 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 MARCH6O60337 910 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 MMP1P03956 469 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 DSC3Q14574 896 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 NCAPH2Q6IBW4 605 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 ANO5Q75V66 913 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 NLRP7Q8WX94 980 aa20.66■□□□□ 0.9
PSPC1-202ENST00000427943 NSUN3Q9H649 340 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms