RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RC3H2Q9HBD1 1191 aaKnown RBP17.06■□□□□ 0.32
PHF1-204ENST00000427826 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 KCNMB3Q9NPA1 279 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 C1orf112Q9NSG2 853 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 GJB4Q9NTQ9 266 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 ST3GAL5Q9UNP4 418 aa17.06■□□□□ 0.32
PHF1-204ENST00000427826 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 SLC37A4O43826 429 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
PHF1-204ENST00000427826 VTNP04004 478 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 BMPR1AP36894 532 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
PHF1-204ENST00000427826 DNM2P50570 870 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 CLCN3P51790 818 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 PSMC5P62195 406 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 UGCGQ16739 394 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 TMEM266Q2M3C6 531 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 SLFN12Q8IYM2 578 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 CMTR2Q8IYT2 770 aaKnown RBP17.05■□□□□ 0.32
PHF1-204ENST00000427826 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 OXER1Q8TDS5 423 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 CLP1Q92989 425 aaKnown RBP17.05■□□□□ 0.32
PHF1-204ENST00000427826 OSMRQ99650 979 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
PHF1-204ENST00000427826 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 RGS18Q9NS28 235 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
PHF1-204ENST00000427826 LARGE1O95461 756 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 CTNNB1P35222 781 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 NLRP11P59045 1033 aaKnown RBP17.04■□□□□ 0.32
PHF1-204ENST00000427826 TARBP2Q15633 366 aaKnown RBP17.04■□□□□ 0.32
PHF1-204ENST00000427826 TIGD5Q53EQ6 642 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 SLC24A5Q71RS6 500 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 LRRC71Q8N4P6 559 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 TMEM40Q8WWA1 233 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 ADAM2Q99965 735 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 JPH2Q9BR39 696 aaPredicted RBP17.04■□□□□ 0.32
PHF1-204ENST00000427826 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
PHF1-204ENST00000427826 SEPT9Q9UHD8 586 aaPredicted RBP17.04■□□□□ 0.32
PHF1-204ENST00000427826 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
PHF1-204ENST00000427826 SIP14410 1827 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 MMP1P03956 469 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 EIF4BP23588 611 aaKnown RBP17.03■□□□□ 0.32
PHF1-204ENST00000427826 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
PHF1-204ENST00000427826 NAALADL2Q58DX5 795 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 EXOC8Q8IYI6 725 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 PPP1R16BQ96T49 567 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 ADAMTS10Q9H324 1103 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 VAV3Q9UKW4 847 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 TTC3P53804 2025 aa17.03■□□□□ 0.32
PHF1-204ENST00000427826 DTNBO60941 627 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 STBD1O95210 358 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 P4HBP07237 508 aaKnown RBP17.02■□□□□ 0.32
PHF1-204ENST00000427826 ZSCAN20P17040 1043 aaPredicted RBP17.02■□□□□ 0.32
PHF1-204ENST00000427826 GPC3P51654 580 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 TFF2Q03403 129 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 NR5A1Q13285 461 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
PHF1-204ENST00000427826 MTERF2Q49AM1 385 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 FAM228AQ86W67 206 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 BANK1Q8NDB2 785 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 HAS1Q92839 578 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
PHF1-204ENST00000427826 SCLT1Q96NL6 688 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 LLPHQ9BRT6 129 aaKnown RBP17.02■□□□□ 0.32
PHF1-204ENST00000427826 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
PHF1-204ENST00000427826 IGKV6-21A0A0C4DH24 114 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 C9IYK1 514 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 EML1O00423 815 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 MGEA5O60502 916 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 JAK2O60674 1132 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 BMP1P13497 986 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 FAM189BP81408 668 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 EPHA7Q15375 998 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
PHF1-204ENST00000427826 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 DIS3L2Q8IYB7 885 aaKnown RBP17.01■□□□□ 0.31
PHF1-204ENST00000427826 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 P2RX5Q93086 422 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
PHF1-204ENST00000427826 XIRP2A4UGR9 3374 aa17.01■□□□□ 0.31
PHF1-204ENST00000427826 BTBD18B2RXH4 712 aa17■□□□□ 0.31
PHF1-204ENST00000427826 TNFRSF10AO00220 468 aa17■□□□□ 0.31
PHF1-204ENST00000427826 NCK2O43639 380 aa17■□□□□ 0.31
PHF1-204ENST00000427826 MAFO75444 373 aaPredicted RBP17■□□□□ 0.31
PHF1-204ENST00000427826 LINC00271P0C7V0 271 aa17■□□□□ 0.31
PHF1-204ENST00000427826 DARSP14868 501 aaKnown RBP17■□□□□ 0.31
PHF1-204ENST00000427826 DSC3Q14574 896 aa17■□□□□ 0.31
PHF1-204ENST00000427826 ANO5Q75V66 913 aa17■□□□□ 0.31
PHF1-204ENST00000427826 OTUD6AQ7L8S5 288 aa17■□□□□ 0.31
PHF1-204ENST00000427826 TTC28Q96AY4 2481 aa17■□□□□ 0.31
PHF1-204ENST00000427826 CEP89Q96ST8 783 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms