RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ITGB5P18084 799 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 BMT2Q1RMZ1 405 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 CBWD6Q4V339 395 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 ALKBH5Q6P6C2 394 aaKnown RBP12.71□□□□□ -0.38
FIRRE-201ENST00000427391 GBP6Q6ZN66 633 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 OGFOD1Q8N543 542 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 KRT12Q99456 494 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 PARVGQ9HBI0 331 aa12.71□□□□□ -0.38
FIRRE-201ENST00000427391 IPO5O00410 1097 aaKnown RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 CARSP49589 748 aaKnown RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 FAM153CQ494X1 144 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 ZNF572Q7Z3I7 529 aaPredicted RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 KLHL7Q8IXQ5 586 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 BORCS6Q96GS4 357 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 ZNF341Q9BYN7 854 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 PCIF1Q9H4Z3 704 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 STIM2Q9P246 746 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 FAM153AQ9UHL3 310 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 PCDHGC5Q9Y5F6 944 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 CCDC66A2RUB6 948 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 KCNK3O14649 394 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 EGFRP00533 1210 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 PPP2R5CQ13362 524 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 ZSCAN26Q16670 478 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 DAW1Q8N136 415 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 TXLNBQ8N3L3 684 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 U2AF1L4Q8WU68 220 aaKnown RBP12.7□□□□□ -0.38
FIRRE-201ENST00000427391 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
FIRRE-201ENST00000427391 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.38
FIRRE-201ENST00000427391 SLC26A4O43511 780 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 HIP1RO75146 1068 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 MCM3P25205 808 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
FIRRE-201ENST00000427391 CAP2P40123 477 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 GUCY2DQ02846 1103 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 ZNF720Q7Z2F6 126 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
FIRRE-201ENST00000427391 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 NFU1Q9UMS0 254 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 GLYCTKQ8IVS8 523 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 RABEP2Q9H5N1 569 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 EPB41L5Q9HCM4 733 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
FIRRE-201ENST00000427391 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
FIRRE-201ENST00000427391 EVI5O60447 810 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 GUCY2FP51841 1108 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 JAM2P57087 298 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 DLG4P78352 724 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ARHGAP44Q17R89 818 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 PALB2Q86YC2 1186 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 AP1M1Q9BXS5 423 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 VIPAS39Q9H9C1 493 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ZNF536O15090 1300 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ALAS1P13196 640 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 DPEP1P16444 411 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 GAP43P17677 238 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 PPARDQ03181 441 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 SPP2Q13103 211 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 MAPK7Q13164 816 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 DNAJC21Q5F1R6 531 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 OLIG1Q8TAK6 271 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ACBD3Q9H3P7 528 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 OSGEPQ9NPF4 335 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 LUC7LQ9NQ29 371 aaKnown RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 KCNH7Q9NS40 1196 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ARHGEF35A5YM69 484 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ABCB4P21439 1286 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 FMO5P49326 533 aa12.68□□□□□ -0.38
FIRRE-201ENST00000427391 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
FIRRE-201ENST00000427391 DRAP1Q14919 205 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms