RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 ENPP3O14638 875 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 TXKP42681 527 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 DNM2P50570 870 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 NLRP11P59045 1033 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 ADGRE1Q14246 886 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 FAM43BQ6ZT52 329 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 NOSTRINQ8IVI9 506 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 LINC01465Q8N7H1 131 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 TTC12Q9H892 705 aaPredicted RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
NCKIPSD-205ENST00000426678 GPR182O15218 404 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 GPR32O75388 356 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 STBD1O95210 358 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 ANO5Q75V66 913 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 C4orf19Q8IY42 314 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 LINC01599Q8WXQ3 324 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 ERVK-5Q9HDB9 667 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 COL4A4P53420 1690 aaPredicted RBP16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
NCKIPSD-205ENST00000426678 TTC3P53804 2025 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 CHD7Q9P2D1 2997 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 DENND3A2RUS2 1198 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 RFXAPO00287 272 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 MAFO75444 373 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 TRAPPC10P48553 1259 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 TTC38Q5R3I4 469 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 OTUD6AQ7L8S5 288 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 SPRED2Q7Z698 418 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 EXOC8Q8IYI6 725 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 NLRP7Q8WX94 980 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 BACH2Q9BYV9 841 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 ST3GAL5Q9UNP4 418 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 CDH23Q9H251 3354 aa16.28■□□□□ 0.2
NCKIPSD-205ENST00000426678 ARID2Q68CP9 1835 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 EPOPA6NHQ4 379 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 STAG3L1P0CL83 205 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 GJB2P29033 226 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 YWHABP31946 246 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 GPC3P51654 580 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 NPEPPSP55786 919 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ERVK-21P61565 698 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 CDC42EP1Q00587 391 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 CTTNQ14247 550 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ZNF174Q15697 407 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 FAM228AQ86W67 206 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 NPAS4Q8IUM7 802 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 MICALL1Q8N3F8 863 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ZNF668Q96K58 619 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 EIF2AK1Q9BQI3 630 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ADAMTS10Q9H324 1103 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 LRFN2Q9ULH4 789 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.2
NCKIPSD-205ENST00000426678 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 IGKV6-21A0A0C4DH24 114 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 POTEMA6NI47 508 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 EIF4BP23588 611 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 RFC5P40937 340 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 DRP2Q13474 957 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 RTN4RL1Q86UN2 441 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 FIBCD1Q8N539 461 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 FBXO22Q8NEZ5 403 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms