RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 EVI5O60447 810 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
PKP4-205ENST00000426248 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 LAMB3Q13751 1172 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 TDRD12Q587J7 1177 aaKnown RBP17.34■□□□□ 0.37
PKP4-205ENST00000426248 WLSQ5T9L3 541 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
PKP4-205ENST00000426248 HAUS3Q68CZ6 603 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 EEPD1Q7L9B9 569 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 PLAAQ9Y263 795 aa17.34■□□□□ 0.37
PKP4-205ENST00000426248 MYH7P12883 1935 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 LGR5O75473 907 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 SLC8A3P57103 927 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.37
PKP4-205ENST00000426248 KRT31Q15323 416 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 PTPROQ16827 1216 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 NFRKBQ6P4R8 1299 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 GMCL1Q96IK5 515 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 SEC16BQ96JE7 1060 aa17.33■□□□□ 0.37
PKP4-205ENST00000426248 ATP6V1G2O95670 118 aa17.33■□□□□ 0.36
PKP4-205ENST00000426248 KRT71Q3SY84 523 aa17.33■□□□□ 0.36
PKP4-205ENST00000426248 SH3GL2Q99962 352 aa17.33■□□□□ 0.36
PKP4-205ENST00000426248 RNF146Q9NTX7 359 aa17.33■□□□□ 0.36
PKP4-205ENST00000426248 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.36
PKP4-205ENST00000426248 OSBPL1AQ9BXW6 950 aa17.33■□□□□ 0.36
PKP4-205ENST00000426248 LAD1O00515 517 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 ADAMTS3O15072 1205 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 BUB1O43683 1085 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 GNAT1P11488 350 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 PECAM1P16284 738 aaPredicted RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 STAT3P40763 770 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 PLCB4Q15147 1175 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 LRRC23Q53EV4 343 aaPredicted RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 BZW1Q7L1Q6 419 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 LPAR1Q92633 364 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 PAGE5Q96GU1 130 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 ATP6V1G3Q96LB4 118 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 NOVA2Q9UNW9 492 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 RREB1Q92766 1687 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 MOCS3O95396 460 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 MTIF2P46199 727 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 SPAG1Q07617 926 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 HERC4Q5GLZ8 1057 aaPredicted RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 DNM3Q9UQ16 869 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 KCNJ18B7U540 433 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 NCK2O43639 380 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 CARSP49589 748 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.365e-7■■□□□ 13.2
PKP4-205ENST00000426248 KCNJ12Q14500 433 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 ANKRD20A8PQ5CZ79 823 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 GMCL1P1Q8NEA9 526 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 MKL1Q969V6 931 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 ZNF577Q9BSK1 485 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 DNM1LO00429 736 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 RMDN3Q96TC7 470 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 KRT12Q99456 494 aa17.32■□□□□ 0.36
PKP4-205ENST00000426248 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
PKP4-205ENST00000426248 ABCB11O95342 1321 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 SNED1Q8TER0 1413 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 GOLGA6L10A0A0M3HER8 536 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 VCAM1P19320 739 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 PDCD2Q16342 344 aaPredicted RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 CCDC197Q8NCU1 140 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 LRRC27Q9C0I9 530 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 PYGLP06737 847 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 ZNF18P17022 549 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 ERCC5P28715 1186 aaPredicted RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 IFNAR2P48551 515 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 BACE1P56817 501 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 AMPD2Q01433 879 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 TMEM132AQ24JP5 1023 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 SLFN12Q8IYM2 578 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 ZNF579Q8NAF0 562 aaKnown RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 ZSCAN5CA6NGD5 496 aaPredicted RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 RPS6KA3P51812 740 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 ATP11AP98196 1134 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 DRP2Q13474 957 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 KCTD19Q17RG1 926 aaPredicted RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 LMNTD2Q8IXW0 634 aa17.31■□□□□ 0.36
PKP4-205ENST00000426248 AENQ8WTP8 325 aaKnown RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 PAPOLBQ9NRJ5 636 aaKnown RBP17.31■□□□□ 0.36
PKP4-205ENST00000426248 TTC26A0AVF1 554 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 SLC37A4O43826 429 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 COG2Q14746 738 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 TAF4BQ92750 862 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
PKP4-205ENST00000426248 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 PRM3Q9NNZ6 103 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
PKP4-205ENST00000426248 GRIK3Q13003 919 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms