RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 CYP26B1Q9NR63 512 aa19.13■□□□□ 0.65
FN1-208ENST00000426059 LARSQ9P2J5 1176 aaKnown RBP19.13■□□□□ 0.65
FN1-208ENST00000426059 TRAF3IP3Q9Y228 551 aa19.13■□□□□ 0.65
FN1-208ENST00000426059 PPFIBP1Q86W92 1011 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 MORC4Q8TE76 937 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 ASB14A6NK59 587 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 PDXKO00764 312 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 SLC16A4O15374 487 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 PLS3P13797 630 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 CCDC62Q6P9F0 684 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 NDST4Q9H3R1 872 aa19.12■□□□□ 0.65
FN1-208ENST00000426059 TYW1Q9NV66 732 aaKnown RBP19.12■□□□□ 0.65
FN1-208ENST00000426059 ABT1Q9ULW3 272 aaKnown RBP19.12■□□□□ 0.65
FN1-208ENST00000426059 EIF3DO15371 548 aaKnown RBP eCLIP19.11■□□□□ 0.65
FN1-208ENST00000426059 STRNO43815 780 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 TPM2P07951 284 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 MARK3P27448 753 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 CASP4P49662 377 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 DNM2P50570 870 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 EDRF1Q3B7T1 1238 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 VWA3BQ502W6 1294 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 XKR3Q5GH77 459 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 CELF3Q5SZQ8 465 aaKnown RBP19.11■□□□□ 0.65
FN1-208ENST00000426059 DHX37Q8IY37 1157 aaKnown RBP19.11■□□□□ 0.65
FN1-208ENST00000426059 SEPT1Q8WYJ6 367 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 BSNDQ8WZ55 320 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 XPNPEP1Q9NQW7 623 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 IGKV6D-21A0A0A0MT36 114 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 MANSC4A6NHS7 340 aaPredicted RBP19.11■□□□□ 0.65
FN1-208ENST00000426059 USP27XA6NNY8 438 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 TISP43B9A030 160 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 AKR1B15C9JRZ8 316 aaPredicted RBP19.11■□□□□ 0.65
FN1-208ENST00000426059 CETN3O15182 167 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 CALUO43852 315 aaPredicted RBP19.11■□□□□ 0.65
FN1-208ENST00000426059 DKC1O60832 514 aaKnown RBP eCLIP19.11■□□□□ 0.659e-73■□□□□ 9.3
FN1-208ENST00000426059 NR3C1P04150 777 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 OATP04181 439 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 STAT5BP51692 787 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 SYCP1Q15431 976 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 FOXR2Q6PJQ5 311 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 PLEKHH3Q7Z736 793 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 CEP63Q96MT8 703 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 SPATA33Q96N06 139 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 GPR20Q99678 358 aa19.11■□□□□ 0.65
FN1-208ENST00000426059 CCDC169A6NNP5 214 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 NOP56O00567 594 aaKnown RBP19.1■□□□□ 0.65
FN1-208ENST00000426059 SLC10A3P09131 477 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 GRB14Q14449 540 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 MAN2A1Q16706 1144 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 TMEM139Q8IV31 216 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 NPLOC4Q8TAT6 608 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 STRA6Q9BX79 667 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 PCDHB13Q9Y5F0 798 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 ITIH6Q6UXX5 1313 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 PPP1R37O75864 691 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 AKAP3O75969 853 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 TAPT1Q6NXT6 567 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 IFNL1Q8IU54 200 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 SYCP3Q8IZU3 236 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 PCMTD1Q96MG8 357 aaPredicted RBP19.1■□□□□ 0.65
FN1-208ENST00000426059 TMX1Q9H3N1 280 aa19.1■□□□□ 0.65
FN1-208ENST00000426059 TRMT1Q9NXH9 659 aaKnown RBP19.1■□□□□ 0.65
FN1-208ENST00000426059 RASSF10A6NK89 507 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 FAM155AB1AL88 458 aaPredicted RBP19.09■□□□□ 0.65
FN1-208ENST00000426059 KIF3CO14782 793 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 SNAI1O95863 264 aaPredicted RBP19.09■□□□□ 0.65
FN1-208ENST00000426059 HAUS6Q7Z4H7 955 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 ZC3H3Q8IXZ2 948 aaKnown RBP19.09■□□□□ 0.65
FN1-208ENST00000426059 ABRAQ8N0Z2 381 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 GLG1Q92896 1179 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.09■□□□□ 0.65
FN1-208ENST00000426059 TLL2Q9Y6L7 1015 aa19.09■□□□□ 0.65
FN1-208ENST00000426059 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.08■□□□□ 0.65
FN1-208ENST00000426059 MFAP3LO75121 409 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 ADCYAP1R1P41586 468 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 NPTX2P47972 431 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 TTLL4Q14679 1199 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 KCNV1Q6PIU1 500 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 PAXIP1Q6ZW49 1069 aaPredicted RBP19.08■□□□□ 0.65
FN1-208ENST00000426059 TMEM143Q96AN5 459 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 MAML3Q96JK9 1138 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 PDLIM7Q9NR12 457 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.65
FN1-208ENST00000426059 ADGRA2Q96PE1 1338 aa19.08■□□□□ 0.65
FN1-208ENST00000426059 TTC26A0AVF1 554 aa19.08■□□□□ 0.64
FN1-208ENST00000426059 DGAT1O75907 488 aa19.08■□□□□ 0.64
FN1-208ENST00000426059 MAPK4P31152 587 aa19.08■□□□□ 0.64
FN1-208ENST00000426059 POLGP54098 1239 aaPredicted RBP19.08■□□□□ 0.64
FN1-208ENST00000426059 SCFD2Q8WU76 684 aa19.08■□□□□ 0.64
FN1-208ENST00000426059 BAG1Q99933 345 aaPredicted RBP19.08■□□□□ 0.64
FN1-208ENST00000426059 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
FN1-208ENST00000426059 A0A1W2PQC6 194 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 CYP2J2P51589 502 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 FKBP15Q5T1M5 1219 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 STXBP4Q6ZWJ1 553 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 TRIM59Q8IWR1 403 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 AZI2Q9H6S1 392 aa19.07■□□□□ 0.64
FN1-208ENST00000426059 ATP6V0A4Q9HBG4 840 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms