RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 NFX1Q12986 1120 aaKnown RBP19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 KIZQ2M2Z5 673 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 MTERF2Q49AM1 385 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 NCAPH2Q6IBW4 605 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 MICALL1Q8N3F8 863 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 LRRC71Q8N4P6 559 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 ATXN2LQ8WWM7 1075 aaKnown RBP19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 SUGCTQ9HAC7 445 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 THEGQ9P2T0 379 aa19.63■□□□□ 0.73
SLC6A1-202ENST00000425938 P4HBP07237 508 aaKnown RBP19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 ERVK-21P61565 698 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 EPHA7Q15375 998 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 TARBP2Q15633 366 aaKnown RBP19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 TMEM266Q2M3C6 531 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 TJAP1Q5JTD0 557 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 SP7Q8TDD2 431 aaPredicted RBP19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 TBC1D32Q96NH3 1257 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 OSMRQ99650 979 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 FOXP1Q9H334 677 aaPredicted RBP19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 KIF3AQ9Y496 699 aa19.62■□□□□ 0.73
SLC6A1-202ENST00000425938 REV3LO60673 3130 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 NLRC5Q86WI3 1866 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 GPR182O15218 404 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 ATP2B1P20020 1258 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 MCM2P49736 904 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 DNM2P50570 870 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 GRB10Q13322 594 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 SPRED2Q7Z698 418 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 LINC01465Q8N7H1 131 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 SCLT1Q96NL6 688 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 CDHR5Q9HBB8 845 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 ERVK-5Q9HDB9 667 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 MTUS1Q9ULD2 1270 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 PCDHA12Q9UN75 941 aa19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 NOC2LQ9Y3T9 749 aaKnown RBP19.61■□□□□ 0.73
SLC6A1-202ENST00000425938 GPR32O75388 356 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 STBD1O95210 358 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 NLRP11P59045 1033 aaKnown RBP19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 TMEM40Q8WWA1 233 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 SAMD11Q96NU1 681 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 JPH2Q9BR39 696 aaPredicted RBP19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 LXNQ9BS40 222 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 TTC12Q9H892 705 aaPredicted RBP19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 LMCD1Q9NZU5 365 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 ST3GAL5Q9UNP4 418 aa19.6■□□□□ 0.73
SLC6A1-202ENST00000425938 COL4A4P53420 1690 aaPredicted RBP19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 RALGAPA2Q2PPJ7 1873 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 TMEM150BA6NC51 233 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 LPXNO60711 386 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 STAG3L1P0CL83 205 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 TXKP42681 527 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 MRPS5P82675 430 aaKnown RBP19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 CDC42EP1Q00587 391 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 SPIRE1Q08AE8 756 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 ANO5Q75V66 913 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 NPAS4Q8IUM7 802 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 TMX3Q96JJ7 454 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 TMX1Q9H3N1 280 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 ZSWIM4Q9H7M6 989 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 PPME1Q9Y570 386 aa19.59■□□□□ 0.73
SLC6A1-202ENST00000425938 DENND3A2RUS2 1198 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 MCM7P33993 719 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 GPC3P51654 580 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 PLA2G4FQ68DD2 849 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 OTUD6AQ7L8S5 288 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 RTN4RL1Q86UN2 441 aaPredicted RBP19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 NOSTRINQ8IVI9 506 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 C4orf19Q8IY42 314 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 EXOC8Q8IYI6 725 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 FIBCD1Q8N539 461 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 FBXO22Q8NEZ5 403 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 NEK9Q8TD19 979 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 NLRP7Q8WX94 980 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 SLC7A3Q8WY07 619 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 DYDC2Q96IM9 177 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 CEP170P1Q96L14 293 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 ASB2Q96Q27 587 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 SH2D3AQ9BRG2 576 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 CYP26B1Q9NR63 512 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 C1orf112Q9NSG2 853 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 RGL1Q9NZL6 768 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 LRFN2Q9ULH4 789 aa19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.72
SLC6A1-202ENST00000425938 ADGRA3Q8IWK6 1321 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 SPTBN5Q9NRC6 3674 aaKnown RBP19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 WNT7AO00755 349 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 MAFO75444 373 aaPredicted RBP19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 EIF4BP23588 611 aaKnown RBP19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 CYP4A11Q02928 519 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 CTTNQ14247 550 aaKnown RBP19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 SKIV2LQ15477 1246 aaKnown RBP19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 FAM228AQ86W67 206 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms