RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TRIM29Q14134 588 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 RABEP1Q15276 862 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 EPHA7Q15375 998 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 MTMR9Q96QG7 549 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 FTHL17Q9BXU8 183 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 ST3GAL5Q9UNP4 418 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
SMARCAL1-205ENST00000425815 DDX11L8A8MPP1 907 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 RPS6KA5O75582 802 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 DGKIO75912 1065 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 CD2BP2O95400 341 aaKnown RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 P4HBP07237 508 aaKnown RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 QARSP47897 775 aaKnown RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 NLRP11P59045 1033 aaKnown RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 MTERF2Q49AM1 385 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 FAM228AQ86W67 206 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 FBXO18Q8NFZ0 1043 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 GDPD5Q8WTR4 605 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 C8orf76Q96K31 380 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 ZNF668Q96K58 619 aaPredicted RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 RGL1Q9NZL6 768 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 SEPT9Q9UHD8 586 aaPredicted RBP20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 REV3LO60673 3130 aa20.6■□□□□ 0.89
SMARCAL1-205ENST00000425815 TMOD1P28289 359 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 TBC1D8BQ0IIM8 1120 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 EPC2Q52LR7 807 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 SLFN12Q8IYM2 578 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 TMEM60Q9H2L4 133 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 AKT3Q9Y243 479 aa20.59■□□□□ 0.89
SMARCAL1-205ENST00000425815 ZBTB39O15060 712 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 GPR182O15218 404 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 MARCH6O60337 910 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 SLITRK3O94933 977 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 BAG4O95429 457 aaKnown RBP20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 GPC3P51654 580 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 NPEPPSP55786 919 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 DSC3Q14574 896 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 PLA2G4FQ68DD2 849 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 NCAPH2Q6IBW4 605 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 MICALL1Q8N3F8 863 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 DYDC2Q96IM9 177 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 RGS18Q9NS28 235 aa20.58■□□□□ 0.89
SMARCAL1-205ENST00000425815 GTPBP6O43824 516 aaPredicted RBP20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 MAFO75444 373 aaPredicted RBP20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 CTTNQ14247 550 aaKnown RBP20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 CALCRLQ16602 461 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 NPAS4Q8IUM7 802 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 C4orf19Q8IY42 314 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 TMEM192Q8IY95 271 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 MAP7D2Q96T17 732 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 ADAM2Q99965 735 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 HSD17B14Q9BPX1 270 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 FOXP1Q9H334 677 aaPredicted RBP20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 CYP26B1Q9NR63 512 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 LMCD1Q9NZU5 365 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 PCDHA12Q9UN75 941 aa20.57■□□□□ 0.88
SMARCAL1-205ENST00000425815 C9IYK1 514 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 DLL1O00548 723 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 ATP2B1P20020 1258 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 EIF4BP23588 611 aaKnown RBP20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 FAM189BP81408 668 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 SAFBQ15424 915 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 FAM43BQ6ZT52 329 aaPredicted RBP20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 FIBCD1Q8N539 461 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 FBXO22Q8NEZ5 403 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 LXNQ9BS40 222 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 TTC12Q9H892 705 aaPredicted RBP20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 VCANP13611 3396 aa20.56■□□□□ 0.88
SMARCAL1-205ENST00000425815 MYO9BQ13459 2157 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 COL4A6Q14031 1691 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 XIRP2A4UGR9 3374 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 H3BNC9 293 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 NEMFO60524 1076 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 DARSP14868 501 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 TXKP42681 527 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 SARSP49591 514 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 GATMP50440 423 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 ZNF710Q8N1W2 664 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 CLP1Q92989 425 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 SAMD11Q96NU1 681 aa20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 EIF2AK1Q9BQI3 630 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 COL25A1Q9BXS0 654 aaPredicted RBP20.55■□□□□ 0.88
SMARCAL1-205ENST00000425815 ADGRA3Q8IWK6 1321 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 CSDE1O75534 798 aaKnown RBP20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 FGFR4P22455 802 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 MCM7P33993 719 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 BMPR1AP36894 532 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 ZNF174Q15697 407 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 ODR4Q5SWX8 454 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 SLC24A5Q71RS6 500 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 FAM184AQ8NB25 1140 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 CEP170P1Q96L14 293 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 DHX33Q9H6R0 707 aaKnown RBP20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 ZSWIM4Q9H7M6 989 aa20.54■□□□□ 0.88
SMARCAL1-205ENST00000425815 SUCLA2Q9P2R7 463 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms