RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 TBC1D12O60347 775 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 LRRN2O75325 713 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 ZNF720Q7Z2F6 126 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 ZSWIM2Q8NEG5 633 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 DMGDHQ9UI17 866 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 SLC26A4O43511 780 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 EXOC3O60645 756 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 PSMC2P35998 433 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 MTMR1Q13613 665 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 ARHGAP44Q17R89 818 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 IQCEQ6IPM2 695 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 DAW1Q8N136 415 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 SPATA4Q8NEY3 305 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 NUCKS1Q9H1E3 243 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 SEPT11Q9NVA2 429 aaKnown RBP12.65□□□□□ -0.38
UBR4-207ENST00000425413 VPS18Q9P253 973 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 SYNPO2Q9UMS6 1093 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
UBR4-207ENST00000425413 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.39
UBR4-207ENST00000425413 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 MAP2K7O14733 419 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 ATP9AO75110 1047 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 VCAM1P19320 739 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 NPEPPSP55786 919 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 UGCGQ16739 394 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 CBWD6Q4V339 395 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 CBWD3Q5JTY5 395 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 CBWD5Q5RIA9 395 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 SYTL5Q8TDW5 730 aaPredicted RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 AIPL1Q9NZN9 384 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 FRMPD4Q14CM0 1322 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 NFKBIEO00221 500 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 HSD17B4P51659 736 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 SETQ01105 290 aaPredicted RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 BMT2Q1RMZ1 405 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 METTL14Q9HCE5 456 aaKnown RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 SIX2Q9NPC8 291 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
UBR4-207ENST00000425413 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
UBR4-207ENST00000425413 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 SOX10P56693 466 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 U2AF1L4Q8WU68 220 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 RIN2Q8WYP3 895 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 SYN2Q92777 582 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 TRERF1Q96PN7 1200 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 KIFC3Q9BVG8 833 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 GOLGA8IPA6NC78 632 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 GOLGA8JA6NMD2 632 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 PJA2O43164 708 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 NAB2Q15742 525 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 ZBED3Q96IU2 234 aaPredicted RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 LUC7LQ9NQ29 371 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 TELO2Q9Y4R8 837 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 ESYT3A0FGR9 886 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 DHX15O43143 795 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 DLG4P78352 724 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 MAPK7Q13164 816 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 TNIP1Q15025 636 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 MTMR14Q8NCE2 650 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 CBWD1Q9BRT8 395 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
UBR4-207ENST00000425413 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
UBR4-207ENST00000425413 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
UBR4-207ENST00000425413 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 SLC16A4O15374 487 aa12.62□□□□□ -0.39
UBR4-207ENST00000425413 PEX10O60683 326 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms