RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RNF38Q9H0F5 515 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.38□□□□□ -1.71
SF3B1-205ENST00000424674 KIAA1586Q9HCI6 787 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 APEX2Q9UBZ4 518 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 SUSD2Q9UGT4 822 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 GIT1Q9Y2X7 761 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 HCFC2Q9Y5Z7 792 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 TNKSO95271 1327 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 ZC3H12DA2A288 527 aaKnown RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PABPN1LA6NDY0 278 aaKnown RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 FOXD2O60548 495 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 HMMRO75330 724 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 AGR2O95994 175 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 GLI4P10075 376 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SYN1P17600 705 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 POU3F2P20265 443 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 CCND1P24385 295 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 GTF2A2P52657 109 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PRR5P85299 388 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 TMPRSS15P98073 1019 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PTPN21Q16825 1174 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PRR16Q569H4 304 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 MRM1Q6IN84 353 aaKnown RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 XRRA1Q6P2D8 792 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 C16orf54Q6UWD8 224 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 LHFPL2Q6ZUX7 228 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SAPCD2Q86UD0 394 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 HSCBQ8IWL3 235 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 LMNTD2Q8IXW0 634 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 NKAIN3Q8N8D7 197 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SYT8Q8NBV8 401 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 NETO2Q8NC67 525 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 POF1BQ8WVV4 589 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 CCT6BQ92526 530 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 ALG3Q92685 438 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 USP7Q93009 1102 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 GCC1Q96CN9 775 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 RCC1LQ96I51 464 aaKnown RBP4.37□□□□□ -1.71
SF3B1-205ENST00000424674 AIFM3Q96NN9 605 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 DHRS4Q9BTZ2 278 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 ISCA1Q9BUE6 129 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SLC13A1Q9BZW2 595 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 UNC45AQ9H3U1 944 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 IFT22Q9H7X7 185 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SH3GLB2Q9NR46 395 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 SYNPO2Q9UMS6 1093 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PLA2G2DQ9UNK4 145 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 AFG3L2Q9Y4W6 797 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 PMF1-BGLAPU3KQ54 211 aa4.37□□□□□ -1.71
SF3B1-205ENST00000424674 TRBV23OR9-2A0A075B6M9 112 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 hCG_1642624A0A1W2PR95 340 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 ANKRD34BA5PLL1 514 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 A6NCN8 305 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 C2orf71A6NGG8 1288 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 AGRPO00253 132 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 ZEB2O60315 1214 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 CNOT4O95628 575 aaKnown RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PF4V1P10720 104 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 NCAM1P13591 858 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PAMP19021 973 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 TSPAN7P41732 249 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 GRK6P43250 576 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 FOXO4P98177 505 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 BTKQ06187 659 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 WASHC5Q12768 1159 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 SLC10A6Q3KNW5 377 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 LDHAL6AQ6ZMR3 332 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 C1orf122Q6ZSJ8 110 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 BRINP3Q76B58 766 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PNMA8AQ86V59 439 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 ZDHHC14Q8IZN3 488 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 CRACR2BQ8N4Y2 399 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 LZTR1Q8N653 840 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 TP53I13Q8NBR0 393 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 TSPAN17Q96FV3 270 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 CDC6Q99741 560 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 TRIM8Q9BZR9 551 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 KMT5AQ9NQR1 393 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 TRMT13Q9NUP7 481 aaKnown RBP4.36□□□□□ -1.71
SF3B1-205ENST00000424674 FBLN5Q9UBX5 448 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 NUDT5Q9UKK9 219 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 AKT3Q9Y243 479 aa4.36□□□□□ -1.71
SF3B1-205ENST00000424674 NPHP3-ACAD11A0A0J9YXS1 232 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 A0A1B0GVC2 190 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 GOLGA6L6A8MZA4 724 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 FFAR3O14843 346 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 TBX1O43435 398 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 SUSD5O60279 629 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 TLR5O60602 858 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 TMCC2O75069 709 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms