RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 SNX24Q9Y343 169 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 IGHMBP2P38935 993 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 CCDC152Q4G0S7 254 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 ODF2Q5BJF6 829 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 GKAP1Q5VSY0 366 aaPredicted RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 VSTM1Q6UX27 236 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 CYP4X1Q8N118 509 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 C3orf20Q8ND61 904 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 ROBO3Q96MS0 1386 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 TMCO5BA8MYB1 307 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 POTECB2RU33 542 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 PGRMC1O00264 195 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 SHROOM1Q2M3G4 852 aaPredicted RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 TMEM63BQ5T3F8 832 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 CPLX4Q7Z7G2 160 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 PRUNE1Q86TP1 453 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 EXOC3L1Q86VI1 746 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 ADAM22Q9P0K1 906 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 HGSO14964 777 aaPredicted RBP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 MED24O75448 989 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 ATF3P18847 181 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 FKBP3Q00688 224 aaKnown RBP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 TNIP1Q15025 636 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 CNGA2Q16280 664 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 KSR1Q8IVT5 923 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 SNX29Q8TEQ0 813 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 PIDD1Q9HB75 910 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 GALCP54803 685 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 TNNC1P63316 161 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 CALCRLQ16602 461 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 PNMA8AQ86V59 439 aaPredicted RBP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 ATP8A2Q9NTI2 1148 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 IGF2BP3O00425 579 aaKnown RBP eCLIP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 VCAM1P19320 739 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
TOP2B-203ENST00000424225 LLGL1Q15334 1064 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 TRPM8Q7Z2W7 1104 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 CENPTQ96BT3 561 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
TOP2B-203ENST00000424225 NUDT17P0C025 328 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 CYP11B2P19099 503 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 KIF5BP33176 963 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 SATB1Q01826 763 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 NAA25Q14CX7 972 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 ASIC2Q16515 512 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 TGFBRAP1Q8WUH2 860 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 HERPUD2Q9BSE4 406 aa14.02□□□□□ -0.16
TOP2B-203ENST00000424225 SNX3O60493 162 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 PCP11498 1178 aaKnown RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 RDXP35241 583 aaKnown RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 CLK2P49760 499 aaKnown RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 COG2Q14746 738 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 OTUD6AQ7L8S5 288 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 BSDC1Q9NW68 430 aaPredicted RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 ASTN1O14525 1302 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 ASAP2O43150 1006 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 PLTPP55058 493 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 PTENP60484 403 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 SIX1Q15475 284 aaPredicted RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 GLYCTKQ8IVS8 523 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 MAPKAPK5Q8IW41 473 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 PRELID2Q8N945 189 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 CALR3Q96L12 384 aaKnown RBP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 FGFR1OP2Q9NVK5 253 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 PRKAG3Q9UGI9 489 aa14.02□□□□□ -0.17
TOP2B-203ENST00000424225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP2B-203ENST00000424225 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 TLDC2A0PJX2 215 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 ADAM9Q13443 819 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 TTBK2Q6IQ55 1244 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 DAAM2Q86T65 1068 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 KCNV2Q8TDN2 545 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 PBKQ96KB5 322 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 KCNQ5Q9NR82 932 aa14.01□□□□□ -0.17
TOP2B-203ENST00000424225 SUCLA2Q9P2R7 463 aaPredicted RBP14.01□□□□□ -0.17
TOP2B-203ENST00000424225 NQO1P15559 274 aaKnown RBP14.01□□□□□ -0.17
TOP2B-203ENST00000424225 UBE4AQ14139 1066 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms