RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 FAM26DQ5JW98 314 aa25.29■■□□□ 1.64
EPDR1-202ENST00000423717 ZNF668Q96K58 619 aaPredicted RBP25.29■■□□□ 1.64
EPDR1-202ENST00000423717 SCLT1Q96NL6 688 aa25.29■■□□□ 1.64
EPDR1-202ENST00000423717 JPH2Q9BR39 696 aaPredicted RBP25.29■■□□□ 1.64
EPDR1-202ENST00000423717 DDX19AQ9NUU7 478 aaKnown RBP25.29■■□□□ 1.64
EPDR1-202ENST00000423717 MAFO75444 373 aaPredicted RBP25.28■■□□□ 1.64
EPDR1-202ENST00000423717 GHRP10912 638 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 MGAT3Q09327 533 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 GPNMBQ14956 572 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 RASSF8Q8NHQ8 419 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 CDK5RAP3Q96JB5 506 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 PLIN2Q99541 437 aa25.28■■□□□ 1.64
EPDR1-202ENST00000423717 CELF4Q9BZC1 486 aaKnown RBP25.28■■□□□ 1.64
EPDR1-202ENST00000423717 LOXHD1Q8IVV2 1947 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 BRD1O95696 1058 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 RFC5P40937 340 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 GRIN1Q05586 938 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 ECM1Q16610 540 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 KIZQ2M2Z5 673 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 CABP7Q86V35 215 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 EXOC8Q8IYI6 725 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 CEP89Q96ST8 783 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 OSBPL7Q9BZF2 842 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 MTIF3Q9H2K0 278 aaKnown RBP25.27■■□□□ 1.64
EPDR1-202ENST00000423717 SUCLA2Q9P2R7 463 aaPredicted RBP25.27■■□□□ 1.64
EPDR1-202ENST00000423717 PPME1Q9Y570 386 aa25.27■■□□□ 1.64
EPDR1-202ENST00000423717 SIP14410 1827 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 ARHGEF35A5YM69 484 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 XRCC6P12956 609 aaKnown RBP eCLIP25.26■■□□□ 1.63
EPDR1-202ENST00000423717 LONP1P36776 959 aaKnown RBP25.26■■□□□ 1.63
EPDR1-202ENST00000423717 UBA7P41226 1012 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 RARRES1P49788 294 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 NLRP11P59045 1033 aaKnown RBP25.26■■□□□ 1.63
EPDR1-202ENST00000423717 DRP2Q13474 957 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 EMC2Q15006 297 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 SLC39A14Q15043 492 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 CNKSR3Q6P9H4 555 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 DBF4BQ8NFT6 615 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 SEPT8Q92599 483 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 TMEM143Q96AN5 459 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 MTRQ99707 1265 aa25.26■■□□□ 1.63
EPDR1-202ENST00000423717 USO1O60763 962 aaKnown RBP25.25■■□□□ 1.63
EPDR1-202ENST00000423717 CXCL10P02778 98 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 NCLP19338 710 aaKnown RBP25.25■■□□□ 1.63
EPDR1-202ENST00000423717 MUTP22033 750 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 SPECC1Q5M775 1068 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 MAEAQ7L5Y9 396 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 RHPN2Q8IUC4 686 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 LINC01465Q8N7H1 131 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 VWCEQ96DN2 955 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 AK8Q96MA6 479 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 CLIC6Q96NY7 704 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 OSMRQ99650 979 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 MMTAG2Q9BU76 263 aaKnown RBP25.25■■□□□ 1.63
EPDR1-202ENST00000423717 CSRNP2Q9H175 543 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 CDHR5Q9HBB8 845 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 ATP6V0A4Q9HBG4 840 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 FBXO2Q9UK22 296 aaPredicted RBP25.25■■□□□ 1.63
EPDR1-202ENST00000423717 DNM3Q9UQ16 869 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 ZDHHC9Q9Y397 364 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 KDM3AQ9Y4C1 1321 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 TET1Q8NFU7 2136 aa25.25■■□□□ 1.63
EPDR1-202ENST00000423717 IGKV6-21A0A0C4DH24 114 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 A0A1W2PPC1 479 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 E9PMD0 336 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 NASPP49321 788 aaPredicted RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 DNM1Q05193 864 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 MKRN4PQ13434 485 aaPredicted RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 LPIN1Q14693 890 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 HABP4Q5JVS0 413 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 FBXO47Q5MNV8 452 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 NLRP7Q8WX94 980 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 HERVK_113Q902F9 699 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 CALML4Q96GE6 196 aa25.24■■□□□ 1.63
EPDR1-202ENST00000423717 IFIH1Q9BYX4 1025 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 DHX33Q9H6R0 707 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 DBR1Q9UK59 544 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 SRPRBQ9Y5M8 271 aaKnown RBP25.24■■□□□ 1.63
EPDR1-202ENST00000423717 SPTLC2O15270 562 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 DGAT1O75907 488 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 IKBKEQ14164 716 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 TCTN1Q2MV58 587 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 KRI1Q8N9T8 703 aaKnown RBP25.23■■□□□ 1.63
EPDR1-202ENST00000423717 LINC00301Q8NCQ3 95 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 TCP11Q8WWU5 503 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 BHMT2Q9H2M3 363 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 CXXC1Q9P0U4 656 aaPredicted RBP25.23■■□□□ 1.63
EPDR1-202ENST00000423717 CFAP45Q9UL16 551 aa25.23■■□□□ 1.63
EPDR1-202ENST00000423717 SSBP05455 408 aaKnown RBP eCLIP25.22■■□□□ 1.63
EPDR1-202ENST00000423717 CD52P31358 61 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 KCNJ6P48051 423 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 CRYBB1P53674 252 aaPredicted RBP25.22■■□□□ 1.63
EPDR1-202ENST00000423717 NFX1Q12986 1120 aaKnown RBP25.22■■□□□ 1.63
EPDR1-202ENST00000423717 PLEKHG4Q58EX7 1191 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 TSHZ1Q6ZSZ6 1077 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 NLRP4Q96MN2 994 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 PNMA5Q96PV4 448 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 NT5C3AQ9H0P0 336 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 SLC4A7Q9Y6M7 1214 aa25.22■■□□□ 1.63
EPDR1-202ENST00000423717 GAS2O43903 313 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms