RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CHMP2AO43633 222 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 ZNF862O60290 1169 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 GPR32O75388 356 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 OATP04181 439 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 GTF2F1P35269 517 aaKnown RBP eCLIP20.88■□□□□ 0.934e-11■■■□□ 15.8
SREBF1-206ENST00000423161 CTC1Q2NKJ3 1217 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 TMEM31Q5JXX7 168 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 LRCH2Q5VUJ6 765 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 SLC24A5Q71RS6 500 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 SPPL3Q8TCT6 385 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 TBCKQ8TEA7 893 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 MAP7D2Q96T17 732 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 RIT2Q99578 217 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 LRFN3Q9BTN0 628 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 TEKT3Q9BXF9 490 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 UPF3BQ9BZI7 483 aaKnown RBP20.88■□□□□ 0.93
SREBF1-206ENST00000423161 IGFLR1Q9H665 355 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 PCDHA4Q9UN74 947 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 AKT3Q9Y243 479 aa20.88■□□□□ 0.93
SREBF1-206ENST00000423161 C9IYK1 514 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 PI4K2BG5E9Z4 385 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 DNAJB1P25685 340 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 TMOD1P28289 359 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 JAK3P52333 1124 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 PRKCEQ02156 737 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 UGCGQ16739 394 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 SPOUT1Q5T280 376 aaKnown RBP20.87■□□□□ 0.93
SREBF1-206ENST00000423161 EFCAB12Q6NXP0 572 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 LRRC71Q8N4P6 559 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 LINC01465Q8N7H1 131 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 SLC5A5Q92911 643 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 PPP2R3CQ969Q6 453 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 ZNF274Q96GC6 653 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-206ENST00000423161 LARP6Q9BRS8 491 aaKnown RBP20.87■□□□□ 0.93
SREBF1-206ENST00000423161 C22orf23Q9BZE7 217 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 TM6SF1Q9BZW5 370 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 UNC45AQ9H3U1 944 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 NRBP2Q9NSY0 501 aa20.87■□□□□ 0.93
SREBF1-206ENST00000423161 TBKBP1A7MCY6 615 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 DEXIO95424 95 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 SFNP31947 248 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 NLRP11P59045 1033 aaKnown RBP20.86■□□□□ 0.93
SREBF1-206ENST00000423161 DLX2Q07687 328 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-206ENST00000423161 STK3Q13188 491 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 CLUL1Q15846 466 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 BLIDQ8IZY5 108 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 POF1BQ8WVV4 589 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 GJA10Q969M2 543 aa20.86■□□□□ 0.93
SREBF1-206ENST00000423161 C5orf42Q9H799 3197 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 FAM86C2PA6NEL3 165 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 LINC01565O15544 149 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 TBX10O75333 385 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 IRS1P35568 1242 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 DSC3Q14574 896 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 Q4G0T1 1027 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 FAM102BQ5T8I3 360 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 CPLX2Q6PUV4 134 aaKnown RBP20.85■□□□□ 0.93
SREBF1-206ENST00000423161 ADGRD2Q7Z7M1 963 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 C11orf16Q9NQ32 467 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 TMEM161AQ9NX61 479 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 PRKAG3Q9UGI9 489 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 PCDHB12Q9Y5F1 795 aa20.85■□□□□ 0.93
SREBF1-206ENST00000423161 GPR37L1O60883 481 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 PSMD10O75832 226 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 TDP2O95551 362 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 ZP2Q05996 745 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 MIER3Q7Z3K6 550 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 DAGLBQ8NCG7 672 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 ZNF668Q96K58 619 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-206ENST00000423161 AIFM3Q96NN9 605 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 ADAMTS10Q9H324 1103 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 ELAC1Q9H777 363 aaKnown RBP20.84■□□□□ 0.93
SREBF1-206ENST00000423161 ATP6V0A4Q9HBG4 840 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 AAASQ9NRG9 546 aa20.84■□□□□ 0.93
SREBF1-206ENST00000423161 M0R2N6 131 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 MBTPS2O43462 519 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 FGFR1P11362 822 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 NDUFV1P49821 464 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 FAM189BP81408 668 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 TBC1D8BQ0IIM8 1120 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 ADAM15Q13444 863 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 NPY5RQ15761 445 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 ADHFE1Q8IWW8 467 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 FAM177A1Q8N128 213 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-206ENST00000423161 ZNF710Q8N1W2 664 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 RDM1Q8NG50 284 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 SCLT1Q96NL6 688 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 PDRG1Q9NUG6 133 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 HCSTQ9UBK5 93 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 CD207Q9UJ71 328 aa20.83■□□□□ 0.93
SREBF1-206ENST00000423161 CYP3A7-CYP3A51PA0A087WV96 503 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 EIF4BP23588 611 aaKnown RBP20.82■□□□□ 0.92
SREBF1-206ENST00000423161 CYP3A7P24462 503 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 GPC3P51654 580 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 SMAD4Q13485 552 aaKnown RBP20.82■□□□□ 0.92
SREBF1-206ENST00000423161 NONOQ15233 471 aaKnown RBP eCLIP20.82■□□□□ 0.923e-6■■■□□ 17.5
SREBF1-206ENST00000423161 SMAD2Q15796 467 aaKnown RBP20.82■□□□□ 0.92
SREBF1-206ENST00000423161 GALNT17Q6IS24 598 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms