RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 TMEM110-MUSTN1A8MSY1 372 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 ZBTB22O15209 634 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 P4HBP07237 508 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 PPP1R2P41236 205 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 STXBP2Q15833 593 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 PNMA8AQ86V59 439 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 PAF1Q8N7H5 531 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 POMGNT1Q8WZA1 660 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 TMEM143Q96AN5 459 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 IFT74Q96LB3 600 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 MYH6P13533 1939 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 WDR64B1ANS9 1081 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 EYA4O95677 639 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 NR3C1P04150 777 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 ABCB4P21439 1286 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 KNOP1Q1ED39 458 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 JAKMIP2Q96AA8 810 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 DUSP9Q99956 384 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 A1CFQ9NQ94 594 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 CETN1Q12798 172 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 KCNH2Q12809 1159 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 DMP1Q13316 513 aaPredicted RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 GIT2Q14161 759 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 CCDC6Q16204 474 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 EXOC3L4Q17RC7 722 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 CDCA5Q96FF9 252 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 VPS33BQ9H267 617 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 KMT5AQ9NQR1 393 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 C19orf81C9J6K1 198 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 TBC1D12O60347 775 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 ZMYND10O75800 440 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 MAGEA1P43355 309 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 MRPS25P82663 173 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 PGM5Q15124 567 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 LLGL1Q15334 1064 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 EPHA7Q15375 998 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 Q3C1V9 767 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 OTUD6AQ7L8S5 288 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 SCFD1Q8WVM8 642 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 IFIH1Q9BYX4 1025 aaKnown RBP10.95□□□□□ -0.66
SSPN-202ENST00000422622 PDE11AQ9HCR9 933 aa10.95□□□□□ -0.66
SSPN-202ENST00000422622 SCN9AQ15858 1988 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 LRRC53A6NM62 1247 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 RNF225M0QZC1 329 aaPredicted RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 ATP1A2P50993 1020 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 BTNL9Q6UXG8 535 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 CDR2LQ86X02 465 aaPredicted RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 ANKRD13AQ8IZ07 590 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 SLC35F6Q8N357 371 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 FAM84AQ96KN4 292 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 PXMP2Q9NR77 195 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 GOLGA6BA6NDN3 693 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 CELF2O95319 508 aaKnown RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 SPATA31C1P0DKV0 1188 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 TNNI1P19237 187 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 CTNNA2P26232 953 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 GJC1P36383 396 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 GCLMP48507 274 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 SFMBT2Q5VUG0 894 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 WDR24Q96S15 920 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 RRAGCQ9HB90 399 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 JPH1Q9HDC5 661 aaPredicted RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 GCNT4Q9P109 453 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 KRT5P13647 590 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 EIF4A3P38919 411 aaKnown RBP10.94□□□□□ -0.66
SSPN-202ENST00000422622 CDKAL1Q5VV42 579 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 GJB7Q6PEY0 223 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 PPM1KQ8N3J5 372 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 DEPTORQ8TB45 409 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 ATP6V0A1Q93050 837 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 ADAMTS1Q9UHI8 967 aa10.94□□□□□ -0.66
SSPN-202ENST00000422622 CXCR5P32302 372 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 DSG3P32926 999 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
SSPN-202ENST00000422622 PHLDB2Q86SQ0 1253 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 HOOK3Q86VS8 718 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
SSPN-202ENST00000422622 SPATA20Q8TB22 786 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 FNBP1Q96RU3 617 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 NHEJ1Q9H9Q4 299 aaPredicted RBP10.93□□□□□ -0.66
SSPN-202ENST00000422622 LIMA1Q9UHB6 759 aaKnown RBP10.93□□□□□ -0.66
SSPN-202ENST00000422622 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
SSPN-202ENST00000422622 GGPS1O95749 300 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms