RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 OSMRQ99650 979 aa24.04■■□□□ 1.44
PTPN4-202ENST00000420482 NAP1L4Q99733 375 aaKnown RBP24.04■■□□□ 1.44
PTPN4-202ENST00000420482 ADAM2Q99965 735 aa24.04■■□□□ 1.44
PTPN4-202ENST00000420482 UNC45AQ9H3U1 944 aa24.04■■□□□ 1.44
PTPN4-202ENST00000420482 RGS18Q9NS28 235 aa24.04■■□□□ 1.44
PTPN4-202ENST00000420482 LOXHD1Q8IVV2 1947 aa24.04■■□□□ 1.44
PTPN4-202ENST00000420482 M0R2N6 131 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 PFKFB2O60825 505 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 PSMD10O75832 226 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 CDC42EP1Q00587 391 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 TBC1D8BQ0IIM8 1120 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 SCRN1Q12765 414 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 CRIPAKQ8N1N5 446 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 TMX1Q9H3N1 280 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 DDX25Q9UHL0 483 aaKnown RBP24.03■■□□□ 1.44
PTPN4-202ENST00000420482 FAM50BQ9Y247 325 aa24.03■■□□□ 1.44
PTPN4-202ENST00000420482 TDP2O95551 362 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 GCFC2P16383 781 aaKnown RBP24.02■■□□□ 1.44
PTPN4-202ENST00000420482 IBSPP21815 317 aaPredicted RBP24.02■■□□□ 1.44
PTPN4-202ENST00000420482 CLCN3P51790 818 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 TCEAL5Q5H9L2 206 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 EP400NLQ6ZTU2 488 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 TMEM40Q8WWA1 233 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 PABPC5Q96DU9 382 aaKnown RBP24.02■■□□□ 1.44
PTPN4-202ENST00000420482 SCLT1Q96NL6 688 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 AIFM3Q96NN9 605 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 PPP1R16BQ96T49 567 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 PHF20Q9BVI0 1012 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 CDHR5Q9HBB8 845 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 AAASQ9NRG9 546 aa24.02■■□□□ 1.44
PTPN4-202ENST00000420482 MRPL42Q9Y6G3 142 aaKnown RBP24.02■■□□□ 1.44
PTPN4-202ENST00000420482 EDIL3O43854 480 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 DKC1O60832 514 aaKnown RBP eCLIP24.01■■□□□ 1.434e-16■■■■■ 70.3
PTPN4-202ENST00000420482 GPR32O75388 356 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 MMP1P03956 469 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 LINC00271P0C7V0 271 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 ZSCAN20P17040 1043 aaPredicted RBP24.01■■□□□ 1.43
PTPN4-202ENST00000420482 DNM2P50570 870 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 NLRP11P59045 1033 aaKnown RBP24.01■■□□□ 1.43
PTPN4-202ENST00000420482 INF2Q27J81 1249 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 PAN2Q504Q3 1202 aaKnown RBP24.01■■□□□ 1.43
PTPN4-202ENST00000420482 XKR3Q5GH77 459 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 BRMS1Q9HCU9 246 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 SEPT9Q9UHD8 586 aaPredicted RBP24.01■■□□□ 1.43
PTPN4-202ENST00000420482 TPCN1Q9ULQ1 816 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 KCNJ14Q9UNX9 436 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 EVPLQ92817 2033 aa24.01■■□□□ 1.43
PTPN4-202ENST00000420482 ZNF862O60290 1169 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 EIF4BP23588 611 aaKnown RBP24■■□□□ 1.43
PTPN4-202ENST00000420482 LETM2Q2VYF4 491 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 SPOUT1Q5T280 376 aaKnown RBP24■■□□□ 1.43
PTPN4-202ENST00000420482 NEK8Q86SG6 692 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 FAM228AQ86W67 206 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 LRRC71Q8N4P6 559 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 FAM20AQ96MK3 541 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 MBOAT7Q96N66 472 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 EPHX3Q9H6B9 360 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 ATP6V0A4Q9HBG4 840 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 PCDHB12Q9Y5F1 795 aa24■■□□□ 1.43
PTPN4-202ENST00000420482 GRM6O15303 877 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 HOXA2O43364 376 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 MARCH6O60337 910 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 PLA2G5P39877 138 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 NPY5RQ15761 445 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 ETNPPLQ8TBG4 499 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 JPH2Q9BR39 696 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-202ENST00000420482 NIFKQ9BYG3 293 aaKnown RBP23.99■■□□□ 1.43
PTPN4-202ENST00000420482 ELAC1Q9H777 363 aaKnown RBP23.99■■□□□ 1.43
PTPN4-202ENST00000420482 TMEM161AQ9NX61 479 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 PLAGL2Q9UPG8 496 aa23.99■■□□□ 1.43
PTPN4-202ENST00000420482 C9IYK1 514 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 MGEA5O60502 916 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 AK2P54819 239 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 UGCGQ16739 394 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 CSPP1Q1MSJ5 1256 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 PPP4R3AQ6IN85 833 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 PTCRAQ6ISU1 281 aaPredicted RBP23.98■■□□□ 1.43
PTPN4-202ENST00000420482 LINC01465Q8N7H1 131 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 NEK9Q8TD19 979 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 CLDND1Q9NY35 253 aa23.98■■□□□ 1.43
PTPN4-202ENST00000420482 ORC3Q9UBD5 711 aaPredicted RBP23.98■■□□□ 1.43
PTPN4-202ENST00000420482 TBKBP1A7MCY6 615 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 PSMC5P62195 406 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 MTERF2Q49AM1 385 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 WDR81Q562E7 1941 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 EXOC8Q8IYI6 725 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 NLRP7Q8WX94 980 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 GJA10Q969M2 543 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 LRFN3Q9BTN0 628 aa23.97■■□□□ 1.43
PTPN4-202ENST00000420482 ALG13Q9NP73 1137 aaKnown RBP23.97■■□□□ 1.43
PTPN4-202ENST00000420482 TBX3O15119 743 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 CCNT1O60563 726 aaKnown RBP23.96■■□□□ 1.43
PTPN4-202ENST00000420482 GPC3P51654 580 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 B3GNT9Q6UX72 402 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 PIK3AP1Q6ZUJ8 805 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 ABI1Q8IZP0 508 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 KLHL23Q8NBE8 558 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-202ENST00000420482 KHSRPQ92945 711 aaKnown RBP eCLIP23.96■■□□□ 1.432e-6■■■■□ 22.3
PTPN4-202ENST00000420482 GCOM2Q9BZD3 368 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms