RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 SLC10A4Q96EP9 437 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 RMDN3Q96TC7 470 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 LRRC27Q9C0I9 530 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 EXOC1Q9NV70 894 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 PKD2L1Q9P0L9 805 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 STK24Q9Y6E0 443 aa16.16■□□□□ 0.18
SEMA4D-204ENST00000420101 MYPNQ86TC9 1320 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 KCNJ18B7U540 433 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 TRAF5O00463 557 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 CXCL11O14625 94 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 EZRP15311 586 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 STX17P56962 302 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 KCNJ12Q14500 433 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 CEP85LQ5SZL2 805 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 ZNF658Q5TYW1 1059 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 PROCA1Q8NCQ7 364 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 MXRA8Q9BRK3 442 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 STIM2Q9P246 746 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 ZNF214Q9UL59 606 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 ODF2LQ9ULJ1 636 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 SMCHD1A6NHR9 2005 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 A0A0G2JLL6 359 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 TACC1O75410 805 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 PPP1R37O75864 691 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 FAM107AO95990 144 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 IDEP14735 1019 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 LSP1P33241 339 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 DNM2P50570 870 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 HERVK_113P62684 666 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 IRX1P78414 480 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 PPIL2Q13356 520 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 TKFCQ3LXA3 575 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 FIGNQ5HY92 759 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 NAA35Q5VZE5 725 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 DYMQ7RTS9 669 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 PRRT2Q7Z6L0 340 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 IFT20Q8IY31 132 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 C7orf25Q9BPX7 421 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 TRIM9Q9C026 710 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 BLOC1S4Q9NUP1 217 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 CTNND2Q9UQB3 1225 aa16.15■□□□□ 0.18
SEMA4D-204ENST00000420101 CCDC189A1A4V9 331 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 ABL1P00519 1130 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 MYBL2P10244 700 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 ARP10275 920 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 UBXN1Q04323 297 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 PDE4DQ08499 809 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 SNCBQ16143 134 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 ECM1Q16610 540 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 TEKT3Q9BXF9 490 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 MAPK8IP1Q9UQF2 711 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 GDAQ9Y2T3 454 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
SEMA4D-204ENST00000420101 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 A0A1W2PQJ5 194 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 E9PMD0 336 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 DDX39AO00148 427 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 MED24O75448 989 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 SLC8A3P57103 927 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 KCNB1Q14721 858 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 SLMAPQ14BN4 828 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 PGM5Q15124 567 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 C6orf89Q6UWU4 347 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 ZNF473Q8WTR7 871 aaKnown RBP16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 CHP1Q99653 195 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 BATF3Q9NR55 127 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 SCN4AP35499 1836 aa16.13■□□□□ 0.17
SEMA4D-204ENST00000420101 POTEFA5A3E0 1075 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 IPO5O00410 1097 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 MEIS1O00470 390 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 ENC1O14682 589 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 SLC26A4O43511 780 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 GHRHRQ02643 423 aa16.12■□□□□ 0.17
SEMA4D-204ENST00000420101 PABPC4Q13310 644 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms