RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ATP6V0A4Q9HBG4 840 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ZNF302Q9NR11 478 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 OLFML3Q9NRN5 406 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ANKEF1Q9NU02 776 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ZHX1Q9UKY1 873 aaPredicted RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 PPME1Q9Y570 386 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 CITO14578 2027 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 ANK1P16157 1881 aa6.6□□□□□ -1.35
HMGB3-202ENST00000419110 PDCD11Q14690 1871 aaKnown RBP6.6□□□□□ -1.35
HMGB3-202ENST00000419110 SCN10AQ9Y5Y9 1956 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 H0YCG3 227 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 NKRFO15226 690 aaKnown RBP eCLIP6.59□□□□□ -1.351e-7■■■■□ 25.2
HMGB3-202ENST00000419110 EIF3DO15371 548 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 CA12O43570 354 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 NRDCO43847 1150 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 SORBS3O60504 671 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 ATP9AO75110 1047 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 HIP1RO75146 1068 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 SLITRK3O94933 977 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 GCNT3O95395 438 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 GH1P01241 217 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 TXNP10599 105 aaKnown RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 CDK11BP21127 795 aaKnown RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 CCNE1P24864 410 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 ABCD1P33897 745 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 PRCPP42785 496 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 RARRES1P49788 294 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 APLP1P51693 650 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 POLGP54098 1239 aaPredicted RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 STX17P56962 302 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 PSMC6P62333 389 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 EHHADHQ08426 723 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 DMP1Q13316 513 aaPredicted RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 KIF22Q14807 665 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 NCAPHQ15003 741 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 EMC2Q15006 297 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 FILIP1LQ4L180 1135 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 XKR3Q5GH77 459 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 PLA2G4FQ68DD2 849 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 RINT1Q6NUQ1 792 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 FOXR2Q6PJQ5 311 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 PADI6Q6TGC4 694 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 FAM178BQ8IXR5 827 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 DHX37Q8IY37 1157 aaKnown RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 KIFAP3Q92845 792 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 HVCN1Q96D96 273 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 SPATA33Q96N06 139 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 TINF2Q9BSI4 451 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 ABHD16BQ9H3Z7 469 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 THAP9Q9H5L6 903 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 MRPL44Q9H9J2 332 aaKnown RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 SLC39A2Q9NP94 309 aa6.59□□□□□ -1.35
HMGB3-202ENST00000419110 LARSQ9P2J5 1176 aaKnown RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 WRAP73Q9P2S5 460 aaPredicted RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 ZNF215Q9UL58 517 aaPredicted RBP6.59□□□□□ -1.35
HMGB3-202ENST00000419110 COL1A2P08123 1366 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TANC1Q9C0D5 1861 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 NPHP3-ACAD11A0A0J9YXS1 232 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TRIM49BA6NDI0 452 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 KCNJ18B7U540 433 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 GAS2O43903 313 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 COBLO75128 1261 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 DGAT1O75907 488 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ARIH2O95376 493 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 HOXC6P09630 235 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF18P17022 549 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 EEF1GP26641 437 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TCF7P36402 384 aaPredicted RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 RFC5P40937 340 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TM4SF4P48230 202 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 SLC26A2P50443 739 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF131P52739 623 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 FANCCQ00597 558 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 STK4Q13043 487 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 GIT2Q14161 759 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 KCNJ12Q14500 433 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 BMT2Q1RMZ1 405 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ODR4Q5SWX8 454 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CELF3Q5SZQ8 465 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 MORN1Q5T089 497 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 C6orf132Q5T0Z8 1188 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 UTP14CQ5TAP6 766 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CDKAL1Q5VV42 579 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 OLFML2BQ68BL8 750 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TTI2Q6NXR4 508 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 C17orf99Q6UX52 265 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ABHD15Q6UXT9 468 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 C1orf186Q6ZWK4 172 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CSGALNACT2Q8N6G5 542 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF784Q8NCA9 323 aaPredicted RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CCDC150Q8NCX0 1101 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 GOLGA5Q8TBA6 731 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms