RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 KRT17Q04695 432 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 COL9A3Q14050 684 aaPredicted RBP16.18■□□□□ 0.18
TTC38-202ENST00000417709 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 ZNF484Q5JVG2 852 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 SWSAP1Q6NVH7 229 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 PDXDC2PQ6P474 469 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 KCNT2Q6UVM3 1135 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 ABHD15Q6UXT9 468 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 OSMRQ99650 979 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 LRRC2Q9BYS8 371 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 NGRNQ9NPE2 291 aaKnown RBP16.18■□□□□ 0.18
TTC38-202ENST00000417709 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 LZTS1Q9Y250 596 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 NR2E1Q9Y466 385 aa16.18■□□□□ 0.18
TTC38-202ENST00000417709 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
TTC38-202ENST00000417709 MEIS1O00470 390 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
TTC38-202ENST00000417709 SGSM2O43147 1006 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 GALR2O43603 387 aaPredicted RBP16.17■□□□□ 0.18
TTC38-202ENST00000417709 VTNP04004 478 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 WEE2P0C1S8 567 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CALM1P0DP23 149 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CALM2P0DP24 149 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CALM3P0DP25 149 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CES5AQ6NT32 575 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 CASD1Q96PB1 797 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 SMOC2Q9H3U7 446 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
TTC38-202ENST00000417709 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 BRD1O95696 1058 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 ATP4AP20648 1035 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 CA8P35219 290 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 NAPAP54920 295 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 DSC3Q14574 896 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 ASCL5Q7RTU5 278 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 CCDC60Q8IWA6 550 aaPredicted RBP16.16■□□□□ 0.18
TTC38-202ENST00000417709 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 ZNF558Q96NG5 402 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 TMEM117Q9H0C3 514 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 RIC8AQ9NPQ8 531 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 SPG21Q9NZD8 308 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 LIMD1Q9UGP4 676 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
TTC38-202ENST00000417709 DCHS1Q96JQ0 3298 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 C2CD4DB7Z1M9 353 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 GPR32O75388 356 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 CXCL14O95715 111 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 FOSP01100 380 aaPredicted RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 ASGR2P07307 311 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 LIFRP42702 1097 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 KANK3Q6NY19 840 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 FAM43BQ6ZT52 329 aaPredicted RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 TMTC3Q6ZXV5 915 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 UBALD2Q8IYN6 164 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 ABI1Q8IZP0 508 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 C12orf76Q8N812 135 aaPredicted RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 TMEM105Q8N8V8 129 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 MRPL43Q8N983 215 aaKnown RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 MTA3Q9BTC8 594 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 ADAM7Q9H2U9 754 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 POMKQ9H5K3 350 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 ELAC1Q9H777 363 aaKnown RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
TTC38-202ENST00000417709 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
TTC38-202ENST00000417709 DMXL1Q9Y485 3027 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 NT5C1B-RDH14C9J2C7 533 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
TTC38-202ENST00000417709 NUBP1P53384 320 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 NLRP11P59045 1033 aaKnown RBP16.14■□□□□ 0.17
TTC38-202ENST00000417709 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 MIS18BP1Q6P0N0 1132 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 PLA2G4DQ86XP0 818 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 CASP10Q92851 521 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 ZNF668Q96K58 619 aaPredicted RBP16.14■□□□□ 0.17
TTC38-202ENST00000417709 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
TTC38-202ENST00000417709 COL1A2P08123 1366 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 C2orf71A6NGG8 1288 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 PROB1E7EW31 1015 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
TTC38-202ENST00000417709 CLASP2O75122 1294 aaKnown RBP16.13■□□□□ 0.17
TTC38-202ENST00000417709 C22orf31O95567 290 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 ADCY7P51828 1080 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
TTC38-202ENST00000417709 RARS2Q5T160 578 aaKnown RBP16.13■□□□□ 0.17
TTC38-202ENST00000417709 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 TMEM87AQ8NBN3 555 aa16.13■□□□□ 0.17
TTC38-202ENST00000417709 MFSD1Q9H3U5 465 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms