RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TRAPPC12Q8WVT3 735 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 KAT2BQ92831 832 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 SYAP1Q96A49 352 aaPredicted RBP9.41□□□□□ -0.9
TRIM48-201ENST00000417545 MTRQ99707 1265 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 GOLPH3LQ9H4A5 285 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 SUGCTQ9HAC7 445 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 SETD4Q9NVD3 440 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 WRAP73Q9P2S5 460 aaPredicted RBP9.41□□□□□ -0.9
TRIM48-201ENST00000417545 SERTAD1Q9UHV2 236 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 MYH11P35749 1972 aa9.41□□□□□ -0.9
TRIM48-201ENST00000417545 ARVCFO00192 962 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 HAS3O00219 553 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 GAS2O43903 313 aaKnown RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 FAM13AO94988 1023 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 IDEP14735 1019 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 EN2P19622 333 aaPredicted RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 ATP4AP20648 1035 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 KLRC1P26715 233 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 RARRES1P49788 294 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 ASIC1P78348 528 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 RAD51AP2Q09MP3 1159 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 EMC2Q15006 297 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 ECM1Q16610 540 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 PTGISQ16647 500 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 FAM102BQ5T8I3 360 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 SYT2Q8N9I0 419 aaPredicted RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.9
TRIM48-201ENST00000417545 TNMDQ9H2S6 317 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 AKT3Q9Y243 479 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 HPSEQ9Y251 543 aa9.4□□□□□ -0.9
TRIM48-201ENST00000417545 A0A087X0B3 334 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 ZBTB39O15060 712 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 NR1I2O75469 434 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 RPLP2P05387 115 aaKnown RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 LIG1P18858 919 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 EFCAB12Q6NXP0 572 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 MTHFD1LQ6UB35 978 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SLC39A5Q6ZMH5 540 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 DYMQ7RTS9 669 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 KCNK18Q7Z418 384 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 CCDC65Q8IXS2 484 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 LRRC71Q8N4P6 559 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 PSPC1Q8WXF1 523 aaKnown RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 STAMQ92783 540 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 DRC1Q96MC2 740 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 HTATIP2Q9BUP3 242 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 KCND2Q9NZV8 630 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 PRKAG2Q9UGJ0 569 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 EVPLQ92817 2033 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TRIP12Q14669 1992 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 FAM237AA0A1B0GTK4 181 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TREHO43280 583 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 MAFO75444 373 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SMC2O95347 1197 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 CLCN3P51790 818 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 RTP1P59025 263 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TFDP1Q14186 410 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 PPP2R5AQ15172 486 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 GDF6Q6KF10 455 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 RINT1Q6NUQ1 792 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 DDX12PQ92771 950 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 KIFAP3Q92845 792 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 TIGD1Q96MW7 591 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 PRDM5Q9NQX1 630 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 BLOC1S4Q9NUP1 217 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 EXOC1Q9NV70 894 aa9.39□□□□□ -0.91
TRIM48-201ENST00000417545 SUCLA2Q9P2R7 463 aaPredicted RBP9.39□□□□□ -0.91
TRIM48-201ENST00000417545 HTTP42858 3142 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 SMIM35A0A1B0GVV1 85 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 LRRIQ4A6NIV6 560 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
TRIM48-201ENST00000417545 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
TRIM48-201ENST00000417545 HIP1RO75146 1068 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 STBD1O95210 358 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 C22orf31O95567 290 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 MYL1P05976 194 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 CYP11B2P19099 503 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 SLC12A3P55017 1021 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 PTK7Q13308 1070 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 DMP1Q13316 513 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms