RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 LPIN1Q14693 890 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 GRM4Q14833 912 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 RBM23Q86U06 439 aaKnown RBP14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 MICAL1Q8TDZ2 1067 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 MSLNLQ96KJ4 702 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 IRF2BPLQ9H1B7 796 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 TFIP11Q9UBB9 837 aaKnown RBP14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 MAD2L2Q9UI95 211 aa14.39□□□□□ -0.11
SDCCAG3-205ENST00000417512 PALM3A6NDB9 673 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 LOC730098B7Z3J9 87 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 NRIP1P48552 1158 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 COASYQ13057 564 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 CAMK1Q14012 370 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 SASS6Q6UVJ0 657 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 SPPL3Q8TCT6 385 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 DNAJB3Q8WWF6 145 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 INPP4AQ96PE3 977 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 PIGSQ96S52 555 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 SENP2Q9HC62 589 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 CLEC1BQ9P126 229 aa14.38□□□□□ -0.11
SDCCAG3-205ENST00000417512 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 GFRA3O60609 400 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 ITGB1P05556 798 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SCG2P13521 617 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 DNAJB1P25685 340 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SIGLEC14Q08ET2 396 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 TCF15Q12870 199 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 PPFIA1Q13136 1202 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SLC39A14Q15043 492 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 FAM173BQ6P4H8 233 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 TSHZ1Q6ZSZ6 1077 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 NLRX1Q86UT6 975 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 CMTR2Q8IYT2 770 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 KLHL23Q8NBE8 558 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SMRP1Q8NCR6 262 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 POF1BQ8WVV4 589 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 ATOH1Q92858 354 aaPredicted RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 PYM1Q9BRP8 204 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 PHF7Q9BWX1 381 aaPredicted RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SPZ1Q9BXG8 430 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 TLE6Q9H808 572 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 RC3H2Q9HBD1 1191 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 DACT1Q9NYF0 836 aa14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
SDCCAG3-205ENST00000417512 CUTAO60888 179 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 TCF7P36402 384 aaPredicted RBP14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 MGAT3Q09327 533 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 IER5Q5VY09 327 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 ADGRD2Q7Z7M1 963 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 FSIP1Q8NA03 581 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 GLG1Q92896 1179 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 CUL5Q93034 780 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 RIOX1Q9H6W3 641 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 FAM86C1Q9NVL1 165 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 LRFN2Q9ULH4 789 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 USP15Q9Y4E8 981 aaPredicted RBP14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 TELO2Q9Y4R8 837 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
SDCCAG3-205ENST00000417512 AVPR2P30518 371 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 CD52P31358 61 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 IGBP1P78318 339 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 CBX2Q14781 532 aaPredicted RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 GRIK4Q16099 956 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 SPOUT1Q5T280 376 aaKnown RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 XRRA1Q6P2D8 792 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 RTN4RL1Q86UN2 441 aaPredicted RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 NPAS4Q8IUM7 802 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 NAT10Q9H0A0 1025 aaKnown RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 BARX2Q9UMQ3 279 aaPredicted RBP14.35□□□□□ -0.11
SDCCAG3-205ENST00000417512 M0QZ92 97 aa14.34□□□□□ -0.11
SDCCAG3-205ENST00000417512 PER2O15055 1255 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms