RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TPCN1Q9ULQ1 816 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 STK36Q9NRP7 1315 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 CHMP2AO43633 222 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 ZNF862O60290 1169 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 VTNP04004 478 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 COL19A1Q14993 1142 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 NPY5RQ15761 445 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 PABPC5Q96DU9 382 aaKnown RBP28.55■■■□□ 2.16
VEGFA-208ENST00000417285 AIFM3Q96NN9 605 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 PLAGL2Q9UPG8 496 aa28.55■■■□□ 2.16
VEGFA-208ENST00000417285 MRPL42Q9Y6G3 142 aaKnown RBP28.55■■■□□ 2.16
VEGFA-208ENST00000417285 TCF20Q9UGU0 1960 aaKnown RBP28.55■■■□□ 2.16
VEGFA-208ENST00000417285 GRM6O15303 877 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 CDC42EP1Q00587 391 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 PRKCEQ02156 737 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 MIER3Q7Z3K6 550 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 NEK9Q8TD19 979 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 OSMRQ99650 979 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 AKT3Q9Y243 479 aa28.54■■■□□ 2.16
VEGFA-208ENST00000417285 TDP2O95551 362 aa28.53■■■□□ 2.16
VEGFA-208ENST00000417285 AK2P54819 239 aa28.53■■■□□ 2.16
VEGFA-208ENST00000417285 NLRP11P59045 1033 aaKnown RBP28.53■■■□□ 2.16
VEGFA-208ENST00000417285 FAM189BP81408 668 aa28.53■■■□□ 2.16
VEGFA-208ENST00000417285 LINC01465Q8N7H1 131 aa28.53■■■□□ 2.16
VEGFA-208ENST00000417285 PHF20Q9BVI0 1012 aa28.53■■■□□ 2.16
VEGFA-208ENST00000417285 NIFKQ9BYG3 293 aaKnown RBP28.53■■■□□ 2.16
VEGFA-208ENST00000417285 MYH9P35579 1960 aaKnown RBP28.52■■■□□ 2.16
VEGFA-208ENST00000417285 CCDC194A0A1B0GVG4 234 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 C9IYK1 514 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 MGEA5O60502 916 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 CLCN3P51790 818 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 TBC1D8BQ0IIM8 1120 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 XKR3Q5GH77 459 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 B3GNT9Q6UX72 402 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 FAM228AQ86W67 206 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.52■■■□□ 2.16
VEGFA-208ENST00000417285 ETNPPLQ8TBG4 499 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 WASF1Q92558 559 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 ADAMTS10Q9H324 1103 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 DDX25Q9UHL0 483 aaKnown RBP28.52■■■□□ 2.16
VEGFA-208ENST00000417285 KCNJ14Q9UNX9 436 aa28.52■■■□□ 2.16
VEGFA-208ENST00000417285 MMP1P03956 469 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 EIF4BP23588 611 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 TARBP2Q15633 366 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 UGCGQ16739 394 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 INF2Q27J81 1249 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 PAN2Q504Q3 1202 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 GJA10Q969M2 543 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 FAM20AQ96MK3 541 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 PPP1R16BQ96T49 567 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 NAP1L4Q99733 375 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 C1QTNF1Q9BXJ1 281 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 ELAC1Q9H777 363 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 ALG13Q9NP73 1137 aaKnown RBP28.51■■■□□ 2.15
VEGFA-208ENST00000417285 FAM50BQ9Y247 325 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 RALGAPA2Q2PPJ7 1873 aa28.51■■■□□ 2.15
VEGFA-208ENST00000417285 PPP4R3AQ6IN85 833 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 PTCRAQ6ISU1 281 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-208ENST00000417285 LRRC71Q8N4P6 559 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 PPP2R3CQ969Q6 453 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 ATP6V0A4Q9HBG4 840 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 AAASQ9NRG9 546 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 TMEM161AQ9NX61 479 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 MYO7AQ13402 2215 aa28.5■■■□□ 2.15
VEGFA-208ENST00000417285 GRXCR2A6NFK2 248 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 GCFC2P16383 781 aaKnown RBP28.49■■■□□ 2.15
VEGFA-208ENST00000417285 ZSCAN20P17040 1043 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-208ENST00000417285 DNM2P50570 870 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 DSC3Q14574 896 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 LETM2Q2VYF4 491 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 SPPL3Q8TCT6 385 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 PCDHB12Q9Y5F1 795 aa28.49■■■□□ 2.15
VEGFA-208ENST00000417285 EVPLQ92817 2033 aa28.48■■■□□ 2.15
VEGFA-208ENST00000417285 EP400NLQ6ZTU2 488 aa28.48■■■□□ 2.15
VEGFA-208ENST00000417285 NEK8Q86SG6 692 aa28.48■■■□□ 2.15
VEGFA-208ENST00000417285 KLHL23Q8NBE8 558 aa28.48■■■□□ 2.15
VEGFA-208ENST00000417285 CLDND1Q9NY35 253 aa28.48■■■□□ 2.15
VEGFA-208ENST00000417285 ORC3Q9UBD5 711 aaPredicted RBP28.48■■■□□ 2.15
VEGFA-208ENST00000417285 NLRC5Q86WI3 1866 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 TBKBP1A7MCY6 615 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 HOXA2O43364 376 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 ITGB1P05556 798 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 IBSPP21815 317 aaPredicted RBP28.47■■■□□ 2.15
VEGFA-208ENST00000417285 PSMC5P62195 406 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 CTC1Q2NKJ3 1217 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 FAM102BQ5T8I3 360 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 FAM178BQ8IXR5 827 aa28.47■■■□□ 2.15
VEGFA-208ENST00000417285 DDX11L8A8MPP1 907 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 H3BQ06 376 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-208ENST00000417285 TBX3O15119 743 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 DKC1O60832 514 aaKnown RBP eCLIP28.46■■■□□ 2.15
VEGFA-208ENST00000417285 STBD1O95210 358 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 CTDNEP1O95476 244 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 DARSP14868 501 aaKnown RBP28.46■■■□□ 2.15
VEGFA-208ENST00000417285 GATMP50440 423 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 GPC3P51654 580 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 NEK4P51957 841 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 HYAL1Q12794 435 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 CAMK1Q14012 370 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 CSPP1Q1MSJ5 1256 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms