RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 GPNMBQ14956 572 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 SLC39A14Q15043 492 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 C9orf50Q5SZB4 431 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 KCTD17Q8N5Z5 321 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 LINC01465Q8N7H1 131 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 USP38Q8NB14 1042 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 HERVK_113Q902F9 699 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 RNPC3Q96LT9 517 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 DHX33Q9H6R0 707 aaKnown RBP25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 KIAA1024Q9UPX6 916 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 SQORQ9Y6N5 450 aa25.76■■□□□ 1.71
SMARCB1-205ENST00000417137 KDM3AQ9Y4C1 1321 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 SLC26A4O43511 780 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 NASPP49321 788 aaPredicted RBP25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 MBTPS1Q14703 1052 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 STK38Q15208 465 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 CNKSR3Q6P9H4 555 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 POTEGQ6S5H5 508 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 OTOP2Q7RTS6 562 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 ZNF579Q8NAF0 562 aaKnown RBP25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 SEPT8Q92599 483 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 NT5C3AQ9H0P0 336 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 TFIP11Q9UBB9 837 aaKnown RBP25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 CFAP45Q9UL16 551 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 ATP6V1DQ9Y5K8 247 aa25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 SRPRBQ9Y5M8 271 aaKnown RBP25.75■■□□□ 1.71
SMARCB1-205ENST00000417137 RANBP2P49792 3224 aaKnown RBP25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 PP2D1A8MPX8 630 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 DGAT1O75907 488 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 MARCKSP29966 332 aaPredicted RBP25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 CDC25AP30304 524 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 UBA7P41226 1012 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 RARRES1P49788 294 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 TCP11Q8WWU5 503 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 VWCEQ96DN2 955 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 CDK5RAP3Q96JB5 506 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 SUCLA2Q9P2R7 463 aaPredicted RBP25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 DNM3Q9UQ16 869 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 GINS2Q9Y248 185 aa25.74■■□□□ 1.71
SMARCB1-205ENST00000417137 BAIAP3O94812 1187 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 VTNP04004 478 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 CRYBB1P53674 252 aaPredicted RBP25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 IKBKEQ14164 716 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 PLEKHG4Q58EX7 1191 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 FBXO47Q5MNV8 452 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 ODR4Q5SWX8 454 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 APBB2Q92870 758 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 DDX19AQ9NUU7 478 aaKnown RBP25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 SZT2Q5T011 3432 aa25.73■■□□□ 1.71
SMARCB1-205ENST00000417137 A0A087WWV3 80 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ABHD14A-ACY1A0A1B0GW23 586 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ARHGEF35A5YM69 484 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 EFCAB14O75071 495 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 YEATS4O95619 227 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 GHRP10912 638 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 NLRP11P59045 1033 aaKnown RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 NUCB2P80303 420 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 EMC2Q15006 297 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ZRSR1Q15695 479 aaKnown RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ECM1Q16610 540 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 FOXD4L6Q3SYB3 417 aaPredicted RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 FOXD4L3Q6VB84 417 aaPredicted RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 TSHZ1Q6ZSZ6 1077 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 FAM43BQ6ZT52 329 aaPredicted RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 CABP7Q86V35 215 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 KRI1Q8N9T8 703 aaKnown RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 LINC00301Q8NCQ3 95 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 DBF4BQ8NFT6 615 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 CALML4Q96GE6 196 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 MTRQ99707 1265 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 MMTAG2Q9BU76 263 aaKnown RBP25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ATP6V0A4Q9HBG4 840 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 WDR81Q562E7 1941 aa25.72■■□□□ 1.71
SMARCB1-205ENST00000417137 ZBBXA8MT70 800 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 SPTLC2O15270 562 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 ASAP2O43150 1006 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 GPR32O75388 356 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 MKRN4PQ13434 485 aaPredicted RBP25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 LPIN1Q14693 890 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 KIZQ2M2Z5 673 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 HYIQ5T013 277 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 PSPC1Q8WXF1 523 aaKnown RBP25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 SCLT1Q96NL6 688 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 IFIH1Q9BYX4 1025 aaKnown RBP25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 FBXO2Q9UK22 296 aaPredicted RBP25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 ZDHHC9Q9Y397 364 aa25.71■■□□□ 1.71
SMARCB1-205ENST00000417137 PPP6R2O75170 966 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 LRIT3Q3SXY7 679 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 RASIP1Q5U651 963 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 RASSF8Q8NHQ8 419 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 CSRNP2Q9H175 543 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 SLC4A7Q9Y6M7 1214 aa25.7■■□□□ 1.7
SMARCB1-205ENST00000417137 EYA4O95677 639 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 GPC3P51654 580 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 GRIN1Q05586 938 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 DRP2Q13474 957 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 PADI6Q6TGC4 694 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 RHPN2Q8IUC4 686 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 MCPH1Q8NEM0 835 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 NLRP7Q8WX94 980 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms