RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ODR4Q5SWX8 454 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 SLFN12Q8IYM2 578 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
ITGB1-204ENST00000417122 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 PRDM6Q9NQX0 595 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 TMEM150BA6NC51 233 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 DDX11L8A8MPP1 907 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 DLL1O00548 723 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 GPR182O15218 404 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 QARSP47897 775 aaKnown RBP17.55■□□□□ 0.4
ITGB1-204ENST00000417122 NLRP11P59045 1033 aaKnown RBP17.55■□□□□ 0.4
ITGB1-204ENST00000417122 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
ITGB1-204ENST00000417122 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 RABEP1Q15276 862 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 FAM43BQ6ZT52 329 aaPredicted RBP17.55■□□□□ 0.4
ITGB1-204ENST00000417122 FIBCD1Q8N539 461 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 FBXO22Q8NEZ5 403 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
ITGB1-204ENST00000417122 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
ITGB1-204ENST00000417122 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 DKC1O60832 514 aaKnown RBP eCLIP17.54■□□□□ 0.4
ITGB1-204ENST00000417122 P4HBP07237 508 aaKnown RBP17.54■□□□□ 0.4
ITGB1-204ENST00000417122 EPHA7Q15375 998 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 EPC2Q52LR7 807 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 NCAPH2Q6IBW4 605 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 FAM228AQ86W67 206 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 NPAS4Q8IUM7 802 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 ZNF689Q96CS4 500 aaPredicted RBP17.54■□□□□ 0.4
ITGB1-204ENST00000417122 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 SH2D3AQ9BRG2 576 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 RC3H2Q9HBD1 1191 aaKnown RBP17.54■□□□□ 0.4
ITGB1-204ENST00000417122 LMCD1Q9NZU5 365 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 ST3GAL5Q9UNP4 418 aa17.54■□□□□ 0.4
ITGB1-204ENST00000417122 ADGRA3Q8IWK6 1321 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 ST18O60284 1047 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 MGEA5O60502 916 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 DGKIO75912 1065 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 CALCRLQ16602 461 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 ANO5Q75V66 913 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 CRIPAKQ8N1N5 446 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 FAM184AQ8NB25 1140 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 ADAMTS10Q9H324 1103 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 THEGQ9P2T0 379 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 PCDHA12Q9UN75 941 aa17.53■□□□□ 0.4
ITGB1-204ENST00000417122 IGKV6-21A0A0C4DH24 114 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 DENND3A2RUS2 1198 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 WNT7AO00755 349 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 NEMFO60524 1076 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 DNM2P50570 870 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 GPC3P51654 580 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 DRP2Q13474 957 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 BTG3Q14201 252 aaPredicted RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 PLA2G4FQ68DD2 849 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 C4orf19Q8IY42 314 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 ZNF668Q96K58 619 aaPredicted RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 ADAM2Q99965 735 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 LXNQ9BS40 222 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 RGS18Q9NS28 235 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 C1orf112Q9NSG2 853 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 RGL1Q9NZL6 768 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 WRAP73Q9P2S5 460 aaPredicted RBP17.52■□□□□ 0.4
ITGB1-204ENST00000417122 LRFN2Q9ULH4 789 aa17.52■□□□□ 0.4
ITGB1-204ENST00000417122 PRRC2BQ5JSZ5 2229 aaKnown RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 MAFO75444 373 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 IBSPP21815 317 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 ATXN2LQ8WWM7 1075 aaKnown RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 NLRP7Q8WX94 980 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 DYDC2Q96IM9 177 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 JPH2Q9BR39 696 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-204ENST00000417122 CYP26B1Q9NR63 512 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 PCDHB7Q9Y5E2 793 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 UNC80Q8N2C7 3258 aa17.51■□□□□ 0.39
ITGB1-204ENST00000417122 C9IYK1 514 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 H3BNC9 293 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 CTNNB1P35222 781 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 TXKP42681 527 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 NPEPPSP55786 919 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 GPM6BQ13491 265 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
ITGB1-204ENST00000417122 SLC24A5Q71RS6 500 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 CMTR2Q8IYT2 770 aaKnown RBP17.5■□□□□ 0.39
ITGB1-204ENST00000417122 CEP170P1Q96L14 293 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms