RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 ZNF746Q6NUN9 644 aaPredicted RBP12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 ALYREFQ86V81 257 aaKnown RBP12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 TMEM87AQ8NBN3 555 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 NLRP7Q8WX94 980 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 RGS18Q9NS28 235 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 CEP131Q9UPN4 1083 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 COL1A2P08123 1366 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 DOCK5Q9H7D0 1870 aa12.4□□□□□ -0.42
RBFOX2-208ENST00000416721 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 WDR64B1ANS9 1081 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 CPLX1O14810 134 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 C22orf31O95567 290 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 CYP3A4P08684 503 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 ATP4AP20648 1035 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 FGFR4P22455 802 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 SP100P23497 879 aaPredicted RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 PSMA5P28066 241 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 ZBTB33Q86T24 672 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 EFHBQ8N7U6 833 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 CCDC148Q8NFR7 591 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 GJA10Q969M2 543 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 ZMYND12Q9H0C1 365 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 DISC1Q9NRI5 854 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 SIP14410 1827 aa12.39□□□□□ -0.43
RBFOX2-208ENST00000416721 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 ZBTB42B2RXF5 422 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 MAGEB2O15479 319 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 PBX3P40426 434 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 ERVFC1P60507 584 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 KRT17Q04695 432 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TBC1D8BQ0IIM8 1120 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 STK3Q13188 491 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 COL19A1Q14993 1142 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 PKN1Q16512 942 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TMC7Q7Z402 723 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 COLGALT1Q8NBJ5 622 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 CLEC1BQ9P126 229 aa12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
RBFOX2-208ENST00000416721 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 ESYT2A0FGR8 921 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 C9IYK1 514 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 MARCH6O60337 910 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 GPR32O75388 356 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 OATP04181 439 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 SRGAP2BP0DMP2 458 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 LAG3P18627 525 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 TECP42680 631 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 RCAN1P53805 252 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 PRKCEQ02156 737 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 MIER3Q7Z3K6 550 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 CRIPAKQ8N1N5 446 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 MFSD14AQ96MC6 490 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 SH2D3AQ9BRG2 576 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 TEKT3Q9BXF9 490 aa12.37□□□□□ -0.43
RBFOX2-208ENST00000416721 MSH4O15457 936 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 HOXA2O43364 376 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 REC8O95072 547 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 EIF4BP23588 611 aaKnown RBP12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 PDIA3P30101 505 aaKnown RBP12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 HSPA4P34932 840 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 DNM2P50570 870 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 UBE3AQ05086 875 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 KCNT2Q6UVM3 1135 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 TMEM117Q9H0C3 514 aa12.36□□□□□ -0.43
RBFOX2-208ENST00000416721 UNC45AQ9H3U1 944 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms