RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TMEM169Q96HH4 297 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LRCH3Q96II8 777 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MAELQ96JY0 434 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF830Q96NB3 372 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TCF12Q99081 682 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CNPPD1Q9BV87 410 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 EMILIN2Q9BXX0 1053 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 DNAI2Q9GZS0 605 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MAGEH1Q9H213 219 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NCOR1P1Q9H4R4 102 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 VPS37BQ9H9H4 285 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LATS2Q9NRM7 1088 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 RAB6BQ9NRW1 208 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 SPTLC3Q9NUV7 552 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 THG1LQ9NWX6 298 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CHCHD3Q9NX63 227 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TMOD4Q9NZQ9 345 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ZSWIM5Q9P217 1185 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ZMAT5Q9UDW3 170 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TBC1D29Q9UFV1 150 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 HOOK1Q9UJC3 728 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TRIM33Q9UPN9 1127 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 HPS5Q9UPZ3 1129 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TRAF3IP3Q9Y228 551 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TMEM5Q9Y2B1 443 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 POLR3KQ9Y2Y1 108 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 DTNAQ9Y4J8 743 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGB2Q9Y5G2 931 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 KCNMB2Q9Y691 235 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 USP3Q9Y6I4 520 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TDRD9Q8NDG6 1382 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 USP19O94966 1318 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 FLT1P17948 1338 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PRR36Q9H6K5 1346 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 A0A0B4J269 797 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 AKR1B15C9JRZ8 316 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 BOLA2-SMG1P6H3BVE0 249 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 DDX3XO00571 662 aaKnown RBP eCLIP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SART1O43290 800 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ZBTB43O43298 467 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CCP110O43303 1012 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 NCK2O43639 380 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 B3GALT2O43825 422 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 DOK2O60496 412 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 USP2O75604 605 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 DGKIO75912 1065 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SNX4O95219 450 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HTR3BO95264 441 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CRTAMO95727 393 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 QDPRP09417 244 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF865P0CJ78 1059 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ACRP10323 421 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CKMT1AP12532 417 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 NME2P22392 152 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PAX7P23759 505 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PSMA4P25789 261 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HOXD10P28358 340 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HSPA1LP34931 641 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HOXD13P35453 343 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 IL12RB1P42701 662 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ALDH9A1P49189 494 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SEPHS1P49903 392 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ITGA8P53708 1063 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RCAN1P53805 252 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SLC12A2P55011 1212 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CASP6P55212 293 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 POLR2FP61218 127 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RBP5P82980 135 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 IL1RL1Q01638 556 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ADCY2Q08462 1091 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ZBTB17Q13105 803 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 AUHQ13825 339 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RABEP1Q15276 862 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CNN3Q15417 329 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SYCP1Q15431 976 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PFKFB4Q16877 469 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 FAM110CQ1W6H9 321 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 LINC01559Q495D7 138 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 MMEL1Q495T6 779 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 VWA3BQ502W6 1294 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PKDCCQ504Y2 493 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 WDR44Q5JSH3 913 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CDCP2Q5VXM1 449 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RAB12Q6IQ22 244 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RPUSD3Q6P087 351 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 GGT6Q6P531 493 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 TXNDC11Q6PKC3 985 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ANGPTL8Q6UXH0 198 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 NPNTQ6UXI9 565 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 LBX2Q6XYB7 198 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 USP45Q70EL2 814 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PPP1R42Q7Z4L9 355 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF227Q86WZ6 799 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 LURAP1LQ8IV03 231 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CCDC170Q8IYT3 715 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CCDC116Q8IYX3 515 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 FAM160A2Q8N612 972 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CTCFLQ8NI51 663 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms