RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 E7EWF7 191 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 NPR3P17342 541 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 HOXB8P17481 243 aaPredicted RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 NUBP1P53384 320 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 PLCB3Q01970 1234 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 SMC1AQ14683 1233 aaKnown RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 ANGPT1Q15389 498 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 MCTP2Q6DN12 878 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 PDE12Q6L8Q7 609 aaKnown RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 TMC5Q6UXY8 1006 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 CHD1LQ86WJ1 897 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 TICAM2Q86XR7 235 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 ZNF654Q8IZM8 581 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 METTL13Q8N6R0 699 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 RASGRP4Q8TDF6 673 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 HELQQ8TDG4 1101 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 RIN2Q8WYP3 895 aaPredicted RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
LINC01238-201ENST00000416204 C1orf112Q9NSG2 853 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 TMEM161AQ9NX61 479 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 SPG21Q9NZD8 308 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 MYO10Q9HD67 2058 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 ZFHX4Q86UP3 3567 aa10.69□□□□□ -0.7
LINC01238-201ENST00000416204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 STK25O00506 426 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 GPR182O15218 404 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 NARSO43776 548 aaKnown RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 KRT37O76014 449 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 CXCL14O95715 111 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 CCNE2O96020 404 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 MYBP10242 640 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 FGFR4P22455 802 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 CLCN3P51790 818 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 KRT17Q04695 432 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 DSC3Q14574 896 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 SART3Q15020 963 aaKnown RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 CLLU1OSQ5K130 101 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 PLPPR4Q7Z2D5 763 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 HEATR3Q7Z4Q2 680 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 TMEM173Q86WV6 379 aaPredicted RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 ABI1Q8IZP0 508 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 SIX5Q8N196 739 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 NME8Q8N427 588 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 MRPL43Q8N983 215 aaKnown RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 ST13P5Q8NFI4 369 aaPredicted RBP10.68□□□□□ -0.7
LINC01238-201ENST00000416204 NECTIN4Q96NY8 510 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 HINFPQ9BQA5 517 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 MXRA8Q9BRK3 442 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 SPZ1Q9BXG8 430 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 TMEM117Q9H0C3 514 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 FBXL21Q9UKT6 434 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
LINC01238-201ENST00000416204 NCOR2Q9Y618 2525 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 EP300Q09472 2414 aaPredicted RBP10.67□□□□□ -0.7
LINC01238-201ENST00000416204 HIP1O00291 1037 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 CSDE1O75534 798 aaKnown RBP10.67□□□□□ -0.7
LINC01238-201ENST00000416204 IGHDP01880 384 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 RPLP2P05387 115 aaKnown RBP10.67□□□□□ -0.7
LINC01238-201ENST00000416204 MTHFRP42898 656 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 CLCN5P51795 746 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 FAM189BP81408 668 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 ITIH3Q06033 890 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 PDXDC2PQ6P474 469 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 DGLUCYQ7Z3D6 616 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 SLC39A11Q8N1S5 342 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 LRRC43Q8N309 656 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 DTWD2Q8NBA8 298 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 IGDCC4Q8TDY8 1250 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 LY9Q9HBG7 655 aa10.67□□□□□ -0.7
LINC01238-201ENST00000416204 AGO4Q9HCK5 861 aaKnown RBP10.67□□□□□ -0.7
LINC01238-201ENST00000416204 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 GPR32O75388 356 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 C22orf31O95567 290 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 EOMESO95936 686 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 SSBP05455 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC01238-201ENST00000416204 CFHP08603 1231 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 AOC1P19801 751 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ATP4AP20648 1035 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 KIF5BP33176 963 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 PPM1AP35813 382 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 CRYBB1P53674 252 aaPredicted RBP10.66□□□□□ -0.7
LINC01238-201ENST00000416204 BCAR1P56945 870 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ATAT1Q5SQI0 421 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 KIAA1841Q6NSI8 718 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 SWSAP1Q6NVH7 229 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ABHD15Q6UXT9 468 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ECHDC2Q86YB7 292 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
LINC01238-201ENST00000416204 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms