RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-207ENST00000415107 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 TCP11Q8WWU5 503 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 EPSTI1Q96J88 318 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 WNT8AQ9H1J5 351 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 CCDC39Q9UFE4 941 aa13.28□□□□□ -0.28
ATG4B-207ENST00000415107 SIP14410 1827 aa13.27□□□□□ -0.28
ATG4B-207ENST00000415107 ZBTB39O15060 712 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 CXCL10P02778 98 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 PFKMP08237 780 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 RAG1P15918 1043 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 CMA1P23946 247 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 ITGB8P26012 769 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-207ENST00000415107 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 EMC2Q15006 297 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-207ENST00000415107 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 IER5Q5VY09 327 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-207ENST00000415107 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 PPP1R13LQ8WUF5 828 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 CCDC43Q96MW1 224 aaKnown RBP13.27□□□□□ -0.29
ATG4B-207ENST00000415107 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 MTRQ99707 1265 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 MAGEF1Q9HAY2 307 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 XPNPEP1Q9NQW7 623 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 BLOC1S4Q9NUP1 217 aa13.27□□□□□ -0.29
ATG4B-207ENST00000415107 ARHGEF35A5YM69 484 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 ASAP2O43150 1006 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 CYP11B2P19099 503 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 PLCG1P19174 1290 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 NCLP19338 710 aaKnown RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 DNM2P50570 870 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 SLC12A3P55017 1021 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 MRPS6P82932 125 aaKnown RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 E2F4Q16254 413 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 ZNF410Q86VK4 478 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 DNAJB3Q8WWF6 145 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 RAD54LQ92698 747 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 KCNN1Q92952 543 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-207ENST00000415107 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
ATG4B-207ENST00000415107 UMODL1Q5DID0 1318 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 E9PMD0 336 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 GPR32O75388 356 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 BMP8BP34820 402 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 ARL2P36404 184 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 THPOP40225 353 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 CLCN3P51790 818 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.292e-11■□□□□ 10.3
ATG4B-207ENST00000415107 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-207ENST00000415107 PCBP1Q15365 356 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATG4B-207ENST00000415107 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-207ENST00000415107 PSPC1Q8WXF1 523 aaKnown RBP13.25□□□□□ -0.29
ATG4B-207ENST00000415107 CHAMP1Q96JM3 812 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 GDF15Q99988 308 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 C17orf75Q9HAS0 396 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 EVPLQ92817 2033 aa13.25□□□□□ -0.29
ATG4B-207ENST00000415107 A0A087X0B3 334 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 M0QZ92 97 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 CHRNA1P02708 482 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 PLA2G4BP0C869 781 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 CYP2C18P33260 490 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 GPC3P51654 580 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 CRYBB1P53674 252 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-207ENST00000415107 DRP2Q13474 957 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 MBTPS1Q14703 1052 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 GPNMBQ14956 572 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 RRAGBQ5VZM2 374 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
ATG4B-207ENST00000415107 CNNM4Q6P4Q7 775 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms