RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RAB11FIP3O75154 756 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 PRPF6O94906 941 aaKnown RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 ERVK-21P61565 698 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 ADCY2Q08462 1091 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 VMACQ2NL98 169 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 WDR72Q3MJ13 1102 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 IQSEC1Q6DN90 963 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 Q6ZUG5 572 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 CXorf67Q86X51 503 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZNF761Q86XN6 746 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 TXNDC5Q8NBS9 432 aaKnown RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 AJUBAQ96IF1 538 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 SPATA25Q9BR10 227 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 MYL10Q9BUA6 226 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 MENTQ9BUN1 341 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 HAPLN2Q9GZV7 340 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 TMEM168Q9H0V1 697 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 MS4A5Q9H3V2 200 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 TOPORSQ9NS56 1045 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 TYW1Q9NV66 732 aaKnown RBP5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 KCMF1Q9P0J7 381 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 DENND2AQ9ULE3 1009 aa5.28□□□□□ -1.56
HMGB1P11-201ENST00000413899 MAFGO15525 162 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 NOBOXO60393 691 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 ETV4P43268 484 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 MANFP55145 182 aaKnown RBP5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 ANAPC15P60006 121 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 IGBP1P78318 339 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 MAP3K12Q12852 859 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 PDCD1Q15116 288 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 RGL3Q3MIN7 710 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 ZBTB41Q5SVQ8 909 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 PRAMEF9Q5VWM5 478 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 GRAMD4Q6IC98 578 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 LCNL1Q6ZST4 164 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 BMP8AQ7Z5Y6 402 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 SP8Q8IXZ3 490 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 KLHL36Q8N4N3 616 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 COG1Q8WTW3 980 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 MBD6Q96DN6 1003 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 ACAP3Q96P50 834 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 KRTAP4-12Q9BQ66 201 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 VTA1Q9NP79 307 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 ADAM29Q9UKF5 820 aa5.27□□□□□ -1.57
HMGB1P11-201ENST00000413899 A0A0A6YYJ9 748 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 A0A0G2JNJ9 132 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 LCHNA4D1U4 455 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 TRIM13O60858 407 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 PFKMP08237 780 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 ZSCAN22P10073 491 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 KCNC1P48547 511 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 GUCY2FP51841 1108 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 JAG1P78504 1218 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 ZNF827Q17R98 1081 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 TRIM68Q6AZZ1 485 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 MCTP2Q6DN12 878 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 UNQ6494/PRO21346Q6UXR6 183 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 BCL6BQ8N143 479 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 OR5AN1Q8NGI8 311 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 RSAD2Q8WXG1 361 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 AHCYL2Q96HN2 611 aaKnown RBP5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 LCORQ96JN0 433 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 ORAI2Q96SN7 254 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 Q9UFV3 132 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 KCNG1Q9UIX4 513 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 PPP2R3BQ9Y5P8 575 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 NUMBLQ9Y6R0 609 aa5.26□□□□□ -1.57
HMGB1P11-201ENST00000413899 PRSS38A1L453 326 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 MROH6A6NGR9 719 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 OPHN1O60890 802 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 CYP1A1P04798 512 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 CSF2RBP32927 897 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 GJA9P57773 515 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 FSCN1Q16658 493 aaKnown RBP5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 DGKDQ16760 1214 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 INAVAQ3KP66 663 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 OTOP2Q7RTS6 562 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 IFNL2Q8IZJ0 200 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 CNTD1Q8N815 330 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 MARCH10Q8NA82 808 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 LMBR1Q8WVP7 490 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 FERMT2Q96AC1 680 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 KCNC2Q96PR1 638 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 TRIM8Q9BZR9 551 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 MTG2Q9H4K7 406 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 BARX1Q9HBU1 254 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 TMPRSS11EQ9UL52 423 aa5.25□□□□□ -1.57
HMGB1P11-201ENST00000413899 WASHC2CQ9Y4E1 1318 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 ST20-MTHFSA0A0A6YYL1 179 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 APOL3O95236 402 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 HMGCRP04035 888 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 ADCY8P40145 1251 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 GPR15P49685 360 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 EVA1CP58658 441 aa5.24□□□□□ -1.57
HMGB1P11-201ENST00000413899 KIAA2012Q0VF49 1180 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms