RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 MICU3Q86XE3 530 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 PIBF1Q8WXW3 757 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZBTB10Q96DT7 871 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 MSLNLQ96KJ4 702 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 TUBE1Q9UJT0 475 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 PCDHGC5Q9Y5F6 944 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 SNX14Q9Y5W7 946 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 CDY2AQ9Y6F7 541 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 MYO10Q9HD67 2058 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 PNMA6FA0A0J9YX94 578 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMEM221A6NGB7 291 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 M0R296 226 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 STAM2O75886 525 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 DGKIO75912 1065 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 GLP2RO95838 553 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 ITGB1P05556 798 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CALM1P0DP23 149 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CALM2P0DP24 149 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CALM3P0DP25 149 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CPA1P15085 419 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 RXRAP19793 462 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 PSMA5P28066 241 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CTHP32929 405 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TCF7P36402 384 aaPredicted RBP9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 LIFRP42702 1097 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 GATMP50440 423 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TROAPQ12815 778 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 ADAM15Q13444 863 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 GRIK4Q16099 956 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 PAN2Q504Q3 1202 aaKnown RBP9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TAF2Q6P1X5 1199 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TSHZ1Q6ZSZ6 1077 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 SMRP1Q8NCR6 262 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 IGDCC4Q8TDY8 1250 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 AGO3Q9H9G7 860 aaKnown RBP9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 BARX2Q9UMQ3 279 aaPredicted RBP9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 PLAGL2Q9UPG8 496 aa9.44□□□□□ -0.9
UPF3AP1-201ENST00000413731 KLF18A0A0U1RQI7 1052 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 MBLAC1A4D2B0 266 aaPredicted RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 GOLGA8BA8MQT2 603 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 ENPP3O14638 875 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 EYA4O95677 639 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 KCNA2P16389 499 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 CD52P31358 61 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 IGBP1P78318 339 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 MRPS6P82932 125 aaKnown RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 TCF15Q12870 199 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 TRAF1Q13077 416 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 PCNX4Q63HM2 1172 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 CMTR2Q8IYT2 770 aaKnown RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 SMARCC2Q8TAQ2 1214 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 DNAJB3Q8WWF6 145 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 EDAQ92838 391 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 KCNB2Q92953 911 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 SNX27Q96L92 541 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 FAM49AQ9H0Q0 323 aaPredicted RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
UPF3AP1-201ENST00000413731 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 LOC730098B7Z3J9 87 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 MEIS2O14770 477 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZBTB43O43298 467 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 ATP9AO75110 1047 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 IBSPP21815 317 aaPredicted RBP9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 RPS6KB1P23443 525 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 NRIP1P48552 1158 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 PTPN5P54829 565 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMEM62Q0P6H9 643 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 COASYQ13057 564 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 MARCH8Q5T0T0 291 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 APOA5Q6Q788 366 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 RSPH3Q86UC2 560 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 NPAS4Q8IUM7 802 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 EFHBQ8N7U6 833 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms