RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 EDEM3Q9BZQ6 932 aa14.23□□□□□ -0.13
LITAF-203ENST00000413364 NHEJ1Q9H9Q4 299 aaPredicted RBP14.23□□□□□ -0.13
LITAF-203ENST00000413364 FAM207AQ9NSI2 230 aaPredicted RBP14.23□□□□□ -0.13
LITAF-203ENST00000413364 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
LITAF-203ENST00000413364 CETN3O15182 167 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 HOXD13P35453 343 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 CCNHP51946 323 aaPredicted RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 HERVK_113P62684 666 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 ZNF662Q6ZS27 426 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 C1orf186Q6ZWK4 172 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 SCYL3Q8IZE3 742 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 CEP112Q8N8E3 955 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 NACC1Q96RE7 527 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 OLFML3Q9NRN5 406 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 PLAGL2Q9UPG8 496 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 FAN1Q9Y2M0 1017 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 RBBP6Q7Z6E9 1792 aaKnown RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 FRMPD4Q14CM0 1322 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 ZBED4O75132 1171 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 ABL1P00519 1130 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 FDX1P10109 184 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 MYBP10242 640 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 PECAM1P16284 738 aaPredicted RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 SLC5A9Q2M3M2 681 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 C1QTNF12Q5T7M4 302 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 IL31RAQ8NI17 732 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 SYTL5Q8TDW5 730 aaPredicted RBP14.22□□□□□ -0.13
LITAF-203ENST00000413364 HAUS4Q9H6D7 363 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 FAM184BQ9ULE4 1060 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.22□□□□□ -0.13
LITAF-203ENST00000413364 FAM169AQ9Y6X4 670 aa14.22□□□□□ -0.13
LITAF-203ENST00000413364 PDXKO00764 312 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 SPP2Q13103 211 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 TUBB2AQ13885 445 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 RPUSD2Q8IZ73 545 aaKnown RBP14.21□□□□□ -0.13
LITAF-203ENST00000413364 SLC35F6Q8N357 371 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 NEK9Q8TD19 979 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 GOLGA1Q92805 767 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 TUBB2BQ9BVA1 445 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 CTDP1Q9Y5B0 961 aaPredicted RBP14.21□□□□□ -0.13
LITAF-203ENST00000413364 UBIAD1Q9Y5Z9 338 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 DOCK1Q14185 1865 aa14.21□□□□□ -0.13
LITAF-203ENST00000413364 CTAGE9A4FU28 777 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 CALUO43852 315 aaPredicted RBP14.21□□□□□ -0.14
LITAF-203ENST00000413364 PRPF6O94906 941 aaKnown RBP14.21□□□□□ -0.14
LITAF-203ENST00000413364 FAM13AO94988 1023 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 NR2F2P24468 414 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 PPP2R3AQ06190 1150 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 KCNMA1Q12791 1236 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 DRAXINQ8NBI3 349 aaPredicted RBP14.21□□□□□ -0.14
LITAF-203ENST00000413364 SMCR8Q8TEV9 937 aaPredicted RBP14.21□□□□□ -0.14
LITAF-203ENST00000413364 BAP1Q92560 729 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 HOMER2Q9NSB8 354 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 HOMER3Q9NSC5 361 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 KCND2Q9NZV8 630 aa14.21□□□□□ -0.14
LITAF-203ENST00000413364 WRAP73Q9P2S5 460 aaPredicted RBP14.21□□□□□ -0.14
LITAF-203ENST00000413364 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 PTPRAP18433 802 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 GCKP35557 465 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 BACE1P56817 501 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 SLC8A3P57103 927 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 TKFCQ3LXA3 575 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 ANGEL2Q5VTE6 544 aaKnown RBP14.2□□□□□ -0.14
LITAF-203ENST00000413364 FRMD5Q7Z6J6 570 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 TCP11Q8WWU5 503 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 JADE2Q9NQC1 790 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 PICK1Q9NRD5 415 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
LITAF-203ENST00000413364 SEL1LQ9UBV2 794 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 VWA5AO00534 786 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 ZBTB39O15060 712 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
LITAF-203ENST00000413364 GCNT3O95395 438 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 MAGEA8P43361 318 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 PDXDC1Q6P996 788 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 RRAGAQ7L523 313 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 ZNF280CQ8ND82 737 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 NAPGQ99747 312 aaPredicted RBP14.2□□□□□ -0.14
LITAF-203ENST00000413364 LXNQ9BS40 222 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 BCAS3Q9H6U6 928 aa14.2□□□□□ -0.14
LITAF-203ENST00000413364 AGO4Q9HCK5 861 aaKnown RBP14.2□□□□□ -0.14
LITAF-203ENST00000413364 ASTN1O14525 1302 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 DHX15O43143 795 aaKnown RBP14.19□□□□□ -0.14
LITAF-203ENST00000413364 ZNF131P52739 623 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
LITAF-203ENST00000413364 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
LITAF-203ENST00000413364 MIER3Q7Z3K6 550 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 MYCT1Q8N699 235 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 NLGN2Q8NFZ4 835 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 UPF1Q92900 1129 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms