RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 TIFAQ96CG3 184 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 AKT3Q9Y243 479 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 GINS2Q9Y248 185 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 YBX2Q9Y2T7 364 aaKnown RBP18.27■□□□□ 0.52
NOD1-202ENST00000411552 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
NOD1-202ENST00000411552 IGKV6-21A0A0C4DH24 114 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 LAD1O00515 517 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 GPR32O75388 356 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 LYPLA2O95372 231 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 SPATA31C1P0DKV0 1188 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 CD52P31358 61 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 FXR2P51116 673 aaKnown RBP eCLIP18.26■□□□□ 0.51
NOD1-202ENST00000411552 DRP2Q13474 957 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 RAB30Q15771 203 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 TMEM266Q2M3C6 531 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 ZNF697Q5TEC3 545 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
NOD1-202ENST00000411552 OTUD6AQ7L8S5 288 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 BRAPQ7Z569 592 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 TMCO2Q7Z6W1 182 aaPredicted RBP18.26■□□□□ 0.51
NOD1-202ENST00000411552 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 TMEM40Q8WWA1 233 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 CEP170P1Q96L14 293 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 MSRAQ9UJ68 235 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 PCDHA11Q9Y5I1 949 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 CDH23Q9H251 3354 aa18.26■□□□□ 0.51
NOD1-202ENST00000411552 MYOGP15173 224 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 NLRP11P59045 1033 aaKnown RBP18.25■□□□□ 0.51
NOD1-202ENST00000411552 XKR9Q5GH70 373 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 CATSPER3Q86XQ3 398 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 OSMRQ99650 979 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
NOD1-202ENST00000411552 TTYH1Q9H313 450 aaPredicted RBP18.25■□□□□ 0.51
NOD1-202ENST00000411552 ADAMTS10Q9H324 1103 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 PADI3Q9ULW8 664 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 PPME1Q9Y570 386 aa18.25■□□□□ 0.51
NOD1-202ENST00000411552 MYO9BQ13459 2157 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 A0A087WWV3 80 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 MED24O75448 989 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 AMHP03971 560 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 PRPHP41219 470 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 DNM2P50570 870 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 CRYBB1P53674 252 aaPredicted RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 ATP2C1P98194 919 aaPredicted RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 PAK2Q13177 524 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 PDIA5Q14554 519 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 IL17AQ16552 155 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 IGSF22Q8N9C0 903 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 ERMNQ8TAM6 284 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 SLC7A3Q8WY07 619 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 ZNF668Q96K58 619 aaPredicted RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 JPH2Q9BR39 696 aaPredicted RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 NKX2-4Q9H2Z4 354 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 DHX33Q9H6R0 707 aaKnown RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 LRWD1Q9UFC0 647 aa18.24■□□□□ 0.51
NOD1-202ENST00000411552 NOC2LQ9Y3T9 749 aaKnown RBP18.24■□□□□ 0.51
NOD1-202ENST00000411552 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 RPA1P27694 616 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 RFC5P40937 340 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 GPC3P51654 580 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
NOD1-202ENST00000411552 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 ZNF710Q8N1W2 664 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 PIGOQ8TEQ8 1089 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 BMP2KQ9NSY1 1161 aaPredicted RBP18.23■□□□□ 0.51
NOD1-202ENST00000411552 ANKEF1Q9NU02 776 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 MTMR10Q9NXD2 777 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
NOD1-202ENST00000411552 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
NOD1-202ENST00000411552 ENPP3O14638 875 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 STX6O43752 255 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 TLL1O43897 1013 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 GJB5O95377 273 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
NOD1-202ENST00000411552 RESTQ13127 1097 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 EMC2Q15006 297 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 FAM117BQ6P1L5 589 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 POTEGQ6S5H5 508 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 DTHD1Q6ZMT9 781 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 EXOC8Q8IYI6 725 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 LINC01599Q8WXQ3 324 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 ZBED2Q9BTP6 218 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 ZNF576Q9H609 170 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 ERVK-5Q9HDB9 667 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 TTC3P53804 2025 aa18.22■□□□□ 0.51
NOD1-202ENST00000411552 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 CA3P07451 260 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
NOD1-202ENST00000411552 CCT6AP40227 531 aaKnown RBP18.21■□□□□ 0.51
NOD1-202ENST00000411552 RARRES1P49788 294 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 NFX1Q12986 1120 aaKnown RBP18.21■□□□□ 0.51
NOD1-202ENST00000411552 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms