RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 RARRES1P49788 294 aa28.63■■■□□ 2.17
C2orf88-204ENST00000409870 ZNF579Q8NAF0 562 aaKnown RBP28.63■■■□□ 2.17
C2orf88-204ENST00000409870 WNT8AQ9H1J5 351 aa28.63■■■□□ 2.17
C2orf88-204ENST00000409870 DBR1Q9UK59 544 aaKnown RBP28.63■■■□□ 2.17
C2orf88-204ENST00000409870 CKBP12277 381 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 PPIGQ13427 754 aaKnown RBP eCLIP28.62■■■□□ 2.17
C2orf88-204ENST00000409870 KCTD17Q8N5Z5 321 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 LINC01465Q8N7H1 131 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 PNMA5Q96PV4 448 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 CCSER1Q9C0I3 900 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 NT5C3AQ9H0P0 336 aa28.62■■■□□ 2.17
C2orf88-204ENST00000409870 A0A087WWV3 80 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 IGKV6-21A0A0C4DH24 114 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 MAFO75444 373 aaPredicted RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 THPOP40225 353 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 RFC5P40937 340 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 GRB10Q13322 594 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 TMEM119Q4V9L6 283 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 SPECC1Q5M775 1068 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 TMEM199Q8N511 208 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 RETREG2Q8NC44 543 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 LEO1Q8WVC0 666 aaPredicted RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 DNAJB3Q8WWF6 145 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 SYMPKQ92797 1274 aaKnown RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 CCDC43Q96MW1 224 aaKnown RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 FAM161BQ96MY7 647 aa28.61■■■□□ 2.17
C2orf88-204ENST00000409870 FAM49AQ9H0Q0 323 aaPredicted RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 DHX33Q9H6R0 707 aaKnown RBP28.61■■■□□ 2.17
C2orf88-204ENST00000409870 CUTAO60888 179 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 ZRSR1Q15695 479 aaKnown RBP28.6■■■□□ 2.17
C2orf88-204ENST00000409870 TRAF7Q6Q0C0 670 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 USP49Q70CQ1 688 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 RSPH3Q86UC2 560 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 EPSTI1Q96J88 318 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 CDK5RAP3Q96JB5 506 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 SPATA32Q96LK8 384 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 GUCD1Q96NT3 240 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 SCAND2PQ9GZW5 306 aaPredicted RBP28.6■■■□□ 2.17
C2orf88-204ENST00000409870 SELPP16109 830 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 ME1P48163 572 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 AXDND1Q5T1B0 1012 aaPredicted RBP28.6■■■□□ 2.17
C2orf88-204ENST00000409870 ZNF618Q5T7W0 954 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 EFCAB12Q6NXP0 572 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 LRRC8DQ7L1W4 858 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 EXOC8Q8IYI6 725 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 KIAA0319LQ8IZA0 1049 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 LRRC71Q8N4P6 559 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 METTL13Q8N6R0 699 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 SLC7A3Q8WY07 619 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 CALML4Q96GE6 196 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 JPH2Q9BR39 696 aaPredicted RBP28.6■■■□□ 2.17
C2orf88-204ENST00000409870 PCDHA7Q9UN72 937 aa28.6■■■□□ 2.17
C2orf88-204ENST00000409870 SIP14410 1827 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 CDH23Q9H251 3354 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 CSF2RAP15509 400 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 CLCN3P51790 818 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 POLGP54098 1239 aaPredicted RBP28.59■■■□□ 2.17
C2orf88-204ENST00000409870 CCL23P55773 120 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 KCNK18Q7Z418 384 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.59■■■□□ 2.17
C2orf88-204ENST00000409870 DNM3Q9UQ16 869 aa28.59■■■□□ 2.17
C2orf88-204ENST00000409870 SCN5AQ14524 2016 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 E9PMD0 336 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 IQCF3P0C7M6 154 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 TMOD1P28289 359 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 TXLNAP40222 546 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 KARSQ15046 597 aaKnown RBP28.58■■■□□ 2.17
C2orf88-204ENST00000409870 NME8Q8N427 588 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 SUGCTQ9HAC7 445 aa28.58■■■□□ 2.17
C2orf88-204ENST00000409870 GAS2O43903 313 aaKnown RBP28.57■■■□□ 2.16
C2orf88-204ENST00000409870 DGAT1O75907 488 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 EYA4O95677 639 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 CTSHP09668 335 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 EMC2Q15006 297 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 FAM26DQ5JW98 314 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 PSRC1Q6PGN9 363 aaPredicted RBP28.57■■■□□ 2.16
C2orf88-204ENST00000409870 RASSF8Q8NHQ8 419 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 SCLYQ96I15 445 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 PLIN2Q99541 437 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 BHMT2Q9H2M3 363 aa28.57■■■□□ 2.16
C2orf88-204ENST00000409870 ARHGEF35A5YM69 484 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 PLCG1P19174 1290 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 MRPS6P82932 125 aaKnown RBP28.56■■■□□ 2.16
C2orf88-204ENST00000409870 MGAT3Q09327 533 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 MKRN4PQ13434 485 aaPredicted RBP28.56■■■□□ 2.16
C2orf88-204ENST00000409870 DRP2Q13474 957 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 SLC17A8Q8NDX2 589 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 MAP7D2Q96T17 732 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 XPNPEP1Q9NQW7 623 aa28.56■■■□□ 2.16
C2orf88-204ENST00000409870 RSPH10B2B2RC85 870 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 RSPH10BP0C881 870 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 TMEM240Q5SV17 173 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 SHC4Q6S5L8 630 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 MTRQ99707 1265 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 ATP6V0A4Q9HBG4 840 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 BMP2KQ9NSY1 1161 aaPredicted RBP28.55■■■□□ 2.16
C2orf88-204ENST00000409870 CCDC39Q9UFE4 941 aa28.55■■■□□ 2.16
C2orf88-204ENST00000409870 USO1O60763 962 aaKnown RBP28.54■■■□□ 2.16
C2orf88-204ENST00000409870 PARNO95453 639 aaKnown RBP28.54■■■□□ 2.16
C2orf88-204ENST00000409870 RFC2P35250 354 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms