RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ZSCAN22P10073 491 aaPredicted RBP15.64■□□□□ 0.09
GYPC-203ENST00000409836 TMOD1P28289 359 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 CLCN3P51790 818 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 CDC42EP1Q00587 391 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
GYPC-203ENST00000409836 TCTN1Q2MV58 587 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 MTERF2Q49AM1 385 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 PLA2G4FQ68DD2 849 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 EFCAB12Q6NXP0 572 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 DEFB128Q7Z7B8 93 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 TPH2Q8IWU9 490 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 PHOSPHO2Q8TCD6 241 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 SLC7A3Q8WY07 619 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 SLC9A7Q96T83 725 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 MMTAG2Q9BU76 263 aaKnown RBP15.64■□□□□ 0.09
GYPC-203ENST00000409836 IFIH1Q9BYX4 1025 aaKnown RBP15.64■□□□□ 0.09
GYPC-203ENST00000409836 OSBPL7Q9BZF2 842 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
GYPC-203ENST00000409836 CXXC1Q9P0U4 656 aaPredicted RBP15.64■□□□□ 0.09
GYPC-203ENST00000409836 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
GYPC-203ENST00000409836 DGAT1O75907 488 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
GYPC-203ENST00000409836 GPC3P51654 580 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 CRYBB1P53674 252 aaPredicted RBP15.63■□□□□ 0.09
GYPC-203ENST00000409836 NPEPPSP55786 919 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 WDR5P61964 334 aaKnown RBP15.63■□□□□ 0.09
GYPC-203ENST00000409836 BECN1Q14457 450 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 EMC2Q15006 297 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 POTEGQ6S5H5 508 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 ZNF410Q86VK4 478 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 LRRC71Q8N4P6 559 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
GYPC-203ENST00000409836 TMEM40Q8WWA1 233 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 SEPT8Q92599 483 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 CEP170P1Q96L14 293 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 XPNPEP1Q9NQW7 623 aa15.63■□□□□ 0.09
GYPC-203ENST00000409836 BRD1O95696 1058 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 F13A1P00488 732 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 DDIT3P35638 169 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 DRP2Q13474 957 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 ATL3Q6DD88 541 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 OTOP2Q7RTS6 562 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 SNX29Q8TEQ0 813 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 NACC1Q96RE7 527 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
GYPC-203ENST00000409836 AGO3Q9H9G7 860 aaKnown RBP15.62■□□□□ 0.09
GYPC-203ENST00000409836 CHD7Q9P2D1 2997 aa15.62■□□□□ 0.09
GYPC-203ENST00000409836 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 ZBTB39O15060 712 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 VTNP04004 478 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 GHRP10912 638 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 DNM2P50570 870 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 POLGP54098 1239 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 POU5F1BQ06416 359 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 PKP1Q13835 747 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 IKBKEQ14164 716 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 SLC39A14Q15043 492 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 ECM1Q16610 540 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 TMEM119Q4V9L6 283 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 XKR9Q5GH70 373 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 KRT79Q5XKE5 535 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 IFNLR1Q8IU57 520 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 METTL13Q8N6R0 699 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 TCP11Q8WWU5 503 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 USP28Q96RU2 1077 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 FTHL17Q9BXU8 183 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 ERVK-5Q9HDB9 667 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
GYPC-203ENST00000409836 CLIC4Q9Y696 253 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 SLC4A7Q9Y6M7 1214 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 RALGAPA2Q2PPJ7 1873 aa15.61■□□□□ 0.09
GYPC-203ENST00000409836 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 YEATS4O95619 227 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 DARSP14868 501 aaKnown RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 KIZQ2M2Z5 673 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 ODR4Q5SWX8 454 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 FAM173BQ6P4H8 233 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 TRMT1LQ7Z2T5 733 aaKnown RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 CRIPAKQ8N1N5 446 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 MCPH1Q8NEM0 835 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 PSPC1Q8WXF1 523 aaKnown RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 SH2D3AQ9BRG2 576 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 NFKBIZQ9BYH8 718 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 NT5C3AQ9H0P0 336 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 ATP6V0A4Q9HBG4 840 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 AKT3Q9Y243 479 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 SRPRBQ9Y5M8 271 aaKnown RBP15.6■□□□□ 0.09
GYPC-203ENST00000409836 TCHHQ07283 1943 aa15.6■□□□□ 0.09
GYPC-203ENST00000409836 MYH11P35749 1972 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms