RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FLOT1O75955 427 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SLU7O95391 586 aaKnown RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 LMNB1P20700 586 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 ATP1A2P50993 1020 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SKOR1P84550 965 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TRIM32Q13049 653 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 MEA1Q16626 185 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SUPT20HL1Q3ZLR7 823 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 ARSHQ5FYA8 562 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 NOL9Q5SY16 702 aaKnown RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 NBPF12Q5TAG4 269 aaPredicted RBP8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SYT10Q6XYQ8 523 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TOGARAM2Q6ZUX3 1019 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 CCDC170Q8IYT3 715 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 CYP2W1Q8TAV3 490 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 CLEC4DQ8WXI8 215 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TBC1D5Q92609 795 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 HPS3Q969F9 1004 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 ERO1AQ96HE7 468 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 AGBL1Q96MI9 1066 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 GPRC5DQ9NZD1 345 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 ODF2LQ9ULJ1 636 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 TRAF3IP3Q9Y228 551 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
CXCR4-202ENST00000409817 UBE4BO95155 1302 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF541Q9H0D2 1346 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 TRAF5O00463 557 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 PDXKO00764 312 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 EIF3DO15371 548 aaKnown RBP eCLIP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 KIF5CO60282 957 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 SLITRK3O94933 977 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 PTPRAP18433 802 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 HNRNPH3P31942 346 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 KRT83P78385 493 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 OCLNQ16625 522 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 TKFCQ3LXA3 575 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 RAD9BQ6WBX8 426 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 STXBP4Q6ZWJ1 553 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 EPM2AIP1Q7L775 607 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 SCFD1Q8WVM8 642 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 REEP2Q9BRK0 252 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 KCTD10Q9H3F6 313 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 RPAP3Q9H6T3 665 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 DNAI1Q9UI46 699 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 UBIAD1Q9Y5Z9 338 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 EML1O00423 815 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ATP2A1O14983 1001 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 CETN3O15182 167 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 MAFGO15525 162 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 RRP9O43818 475 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ALAS1P13196 640 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 TAL1P17542 331 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 RPL13P26373 211 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 CASQ1P31415 396 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 SPP2Q13103 211 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 NFIL3Q16649 462 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 KNOP1Q1ED39 458 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 CCDC40Q4G0X9 1142 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 RINT1Q6NUQ1 792 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 SYTL5Q8TDW5 730 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 WRNIP1Q96S55 665 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 JADE2Q9NQC1 790 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 ADAMTS5Q9UNA0 930 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
CXCR4-202ENST00000409817 EPN1Q9Y6I3 576 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-202ENST00000409817 VWA5AO00534 786 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 NFIBO00712 420 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 SLC16A3O15427 465 aaKnown RBP8.25□□□□□ -1.09
CXCR4-202ENST00000409817 NDUFA10O95299 355 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 LYPLA2O95372 231 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
CXCR4-202ENST00000409817 GUCY2CP25092 1073 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 GNG11P61952 73 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 PSMC6P62333 389 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 ERVK-24P63145 666 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 CYP4A11Q02928 519 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 LRRC41Q15345 812 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 ARHGAP29Q52LW3 1261 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 C1orf186Q6ZWK4 172 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 FRMD5Q7Z6J6 570 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 TRIM59Q8IWR1 403 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 TPH2Q8IWU9 490 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 RDM1Q8NG50 284 aa8.25□□□□□ -1.09
CXCR4-202ENST00000409817 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms