RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MYO9BQ13459 2157 aa34.87■■■■□ 3.17
TRAF3IP1-203ENST00000409739 CHD9Q3L8U1 2897 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 LAD1O00515 517 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 ZBTB39O15060 712 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 GPR32O75388 356 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 KIZQ2M2Z5 673 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 FERMT3Q86UX7 667 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 USP38Q8NB14 1042 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 CEP170P1Q96L14 293 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TTC3P53804 2025 aa34.86■■■■□ 3.17
TRAF3IP1-203ENST00000409739 MAFO75444 373 aaPredicted RBP34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 CD52P31358 61 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 DRP2Q13474 957 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 RAB30Q15771 203 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 ZNF697Q5TEC3 545 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 HERC6Q8IVU3 1022 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 DEFB123Q8N688 67 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 YBX2Q9Y2T7 364 aaKnown RBP34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 PPME1Q9Y570 386 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 CDH23Q9H251 3354 aa34.85■■■■□ 3.17
TRAF3IP1-203ENST00000409739 SPATA31C1P0DKV0 1188 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 PRPHP41219 470 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 OTUD6AQ7L8S5 288 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TMCO2Q7Z6W1 182 aaPredicted RBP34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TMEM40Q8WWA1 233 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TIFAQ96CG3 184 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 OSMRQ99650 979 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TUFT1Q9NNX1 390 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 MSRAQ9UJ68 235 aa34.84■■■■□ 3.17
TRAF3IP1-203ENST00000409739 MED24O75448 989 aa34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 ATP2C1P98194 919 aaPredicted RBP34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 XKR9Q5GH70 373 aa34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 ERMNQ8TAM6 284 aa34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TTYH1Q9H313 450 aaPredicted RBP34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 DHX33Q9H6R0 707 aaKnown RBP34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 PCDHA11Q9Y5I1 949 aa34.83■■■■□ 3.17
TRAF3IP1-203ENST00000409739 TMEM265A0A087WTH1 108 aa34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 CRYBB1P53674 252 aaPredicted RBP34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 NLRP11P59045 1033 aaKnown RBP34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 PAK2Q13177 524 aa34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 CATSPER3Q86XQ3 398 aa34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 JPH2Q9BR39 696 aaPredicted RBP34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 POLR3CQ9BUI4 534 aaPredicted RBP34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ADAMTS10Q9H324 1103 aa34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 PADI3Q9ULW8 664 aa34.82■■■■□ 3.16
TRAF3IP1-203ENST00000409739 MYOGP15173 224 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 GPC3P51654 580 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 POLGP54098 1239 aaPredicted RBP34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 IL17AQ16552 155 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 IGSF22Q8N9C0 903 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 SLC7A3Q8WY07 619 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ANKEF1Q9NU02 776 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 MTMR6Q9Y217 621 aa34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 NOC2LQ9Y3T9 749 aaKnown RBP34.81■■■■□ 3.16
TRAF3IP1-203ENST00000409739 AMHP03971 560 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RPA1P27694 616 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RFC5P40937 340 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RESTQ13127 1097 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 MYOCDQ8IZQ8 938 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ZNF710Q8N1W2 664 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ZNF668Q96K58 619 aaPredicted RBP34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 NKX2-4Q9H2Z4 354 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 CHD7Q9P2D1 2997 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 LRWD1Q9UFC0 647 aa34.8■■■■□ 3.16
TRAF3IP1-203ENST00000409739 DNM2P50570 870 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 PDIA5Q14554 519 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 HAUS3Q68CZ6 603 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 POTEGQ6S5H5 508 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 PIGOQ8TEQ8 1089 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 FAM161BQ96MY7 647 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RAB34Q9BZG1 259 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ERVK-5Q9HDB9 667 aa34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 BMP2KQ9NSY1 1161 aaPredicted RBP34.79■■■■□ 3.16
TRAF3IP1-203ENST00000409739 STX6O43752 255 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RPS6KA5O75582 802 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 GJB5O95377 273 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 HSP90AA1P07900 732 aaKnown RBP34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 RARRES1P49788 294 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 EMC2Q15006 297 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 DTHD1Q6ZMT9 781 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 EXOC8Q8IYI6 725 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 LINC01599Q8WXQ3 324 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 SEMA6BQ9H3T3 888 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 MTMR10Q9NXD2 777 aa34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 SUCLA2Q9P2R7 463 aaPredicted RBP34.78■■■■□ 3.16
TRAF3IP1-203ENST00000409739 A0A087WWV3 80 aa34.77■■■■□ 3.16
TRAF3IP1-203ENST00000409739 FAM228AQ86W67 206 aa34.77■■■■□ 3.16
TRAF3IP1-203ENST00000409739 TMX1Q9H3N1 280 aa34.77■■■■□ 3.16
TRAF3IP1-203ENST00000409739 NLRC5Q86WI3 1866 aa34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 TLL1O43897 1013 aa34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 NFX1Q12986 1120 aaKnown RBP34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 CCDC43Q96MW1 224 aaKnown RBP34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 SCLT1Q96NL6 688 aa34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 FTHL17Q9BXU8 183 aa34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 ZNF576Q9H609 170 aa34.76■■■■□ 3.16
TRAF3IP1-203ENST00000409739 PP2D1A8MPX8 630 aa34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 GAS2O43903 313 aaKnown RBP34.75■■■■□ 3.15
TRAF3IP1-203ENST00000409739 XRCC6P12956 609 aaKnown RBP eCLIP34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms