RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PIGOQ8TEQ8 1089 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 DHX33Q9H6R0 707 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 AKT3Q9Y243 479 aa22.16■■□□□ 1.14
PDLIM2-207ENST00000409417 VTNP04004 478 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 POLGP54098 1239 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 MKRN4PQ13434 485 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 PKP1Q13835 747 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 LPIN1Q14693 890 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 PTPAQ15257 358 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 KRT79Q5XKE5 535 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 POTEGQ6S5H5 508 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 USP38Q8NB14 1042 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 DBF4BQ8NFT6 615 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 SNX29Q8TEQ0 813 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 SEPT8Q92599 483 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 EVPLQ92817 2033 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 ABHD14A-ACY1A0A1B0GW23 586 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 PP2D1A8MPX8 630 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 GPR32O75388 356 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 GHRP10912 638 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 RARRES1P49788 294 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 IKBKEQ14164 716 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 KIZQ2M2Z5 673 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 FOXD4L5Q5VV16 416 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 TSHZ1Q6ZSZ6 1077 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 FOXD4L4Q8WXT5 416 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 APBB2Q92870 758 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 IFIH1Q9BYX4 1025 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 DBR1Q9UK59 544 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 GINS2Q9Y248 185 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 SLC4A7Q9Y6M7 1214 aa22.15■■□□□ 1.14
PDLIM2-207ENST00000409417 ZBBXA8MT70 800 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 EFCAB14O75071 495 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 F13A1P00488 732 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 CDC25AP30304 524 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 CDC42EP1Q00587 391 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 DRP2Q13474 957 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 ECM1Q16610 540 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 TCTN1Q2MV58 587 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 AK8Q96MA6 479 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 CCDC43Q96MW1 224 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 USP28Q96RU2 1077 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 MMTAG2Q9BU76 263 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 ADAMTS10Q9H324 1103 aa22.14■■□□□ 1.13
PDLIM2-207ENST00000409417 A0A087WWV3 80 aa22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 GAS2O43903 313 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 CRYBB1P53674 252 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 NLRP11P59045 1033 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 CEBPZQ03701 1054 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 EMC2Q15006 297 aa22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 ZNF396Q96N95 335 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 CDHR5Q9HBB8 845 aa22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 SUCLA2Q9P2R7 463 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 KIAA1024Q9UPX6 916 aa22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-207ENST00000409417 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 DGAT1O75907 488 aa22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 NASPP49321 788 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 SLC39A14Q15043 492 aa22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 PPP1R16BQ96T49 567 aa22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 AGO3Q9H9G7 860 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-207ENST00000409417 RBAK-RBAKDNI3L0D1 243 aa22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 SOX1O00570 391 aaPredicted RBP22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 MARCKSP29966 332 aaPredicted RBP22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 LONP1P36776 959 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 FXR1P51114 621 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 GPC3P51654 580 aa22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 OSMRQ99650 979 aa22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 ATP6V0A4Q9HBG4 840 aa22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 DDX19AQ9NUU7 478 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-207ENST00000409417 BRD1O95696 1058 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 ATP2A2P16615 1042 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 CD52P31358 61 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 KCNJ6P48051 423 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 WDR5P61964 334 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 SMAD3P84022 425 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 HYIQ5T013 277 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 FAM109BQ6ICB4 259 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 FAM43BQ6ZT52 329 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 KCTD17Q8N5Z5 321 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 PHOSPHO2Q8TCD6 241 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 TMEM40Q8WWA1 233 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 TCP11Q8WWU5 503 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 TMEM143Q96AN5 459 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 MTRQ99707 1265 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 XPNPEP1Q9NQW7 623 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 BMP2KQ9NSY1 1161 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 PADI3Q9ULW8 664 aa22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 SRPRBQ9Y5M8 271 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-207ENST00000409417 SLC26A4O43511 780 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 GRIN1Q05586 938 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 PAK2Q13177 524 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 ATL3Q6DD88 541 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 RHPN2Q8IUC4 686 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 NLRP7Q8WX94 980 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 PSPC1Q8WXF1 523 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 SCLT1Q96NL6 688 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 SLC9A7Q96T83 725 aa22.09■■□□□ 1.13
PDLIM2-207ENST00000409417 FBXO2Q9UK22 296 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms