RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 MAML3Q96JK9 1138 aa6.52□□□□□ -1.37
SCN1A-203ENST00000409050 ATP6V1G3Q96LB4 118 aa6.52□□□□□ -1.37
SCN1A-203ENST00000409050 RPF1Q9H9Y2 349 aaKnown RBP6.52□□□□□ -1.37
SCN1A-203ENST00000409050 PNMA3Q9UL41 463 aa6.52□□□□□ -1.37
SCN1A-203ENST00000409050 ZNF521Q96K83 1311 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 HNRNPCL2B2RXH8 293 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PPIP5K2O43314 1243 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DLATP10515 647 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PLS3P13797 630 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 C4BPBP20851 252 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PURAQ00577 322 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TRIM69Q86WT6 500 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CPXCR1Q8N123 301 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ARMC2Q8NEN0 867 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 RNF139Q8WU17 664 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PBXIP1Q96AQ6 731 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CHMP6Q96FZ7 201 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 MYL10Q9BUA6 226 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 BTG4Q9NY30 223 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PI4KBQ9UBF8 816 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 EEF1B2P24534 225 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 SESN3P58005 492 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CHRNDQ07001 517 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 RSRC2Q7L4I2 434 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 FAM9CQ8IZT9 166 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PROCA1Q8NCQ7 364 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ICA1LQ8NDH6 482 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 N4BP2L2Q92802 583 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 GJA10Q969M2 543 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 KCNK16Q96T55 309 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TRIM54Q9BYV2 358 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 IL1RAPL1Q9NZN1 696 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 THRAP3Q9Y2W1 955 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TTLL3Q9Y4R7 772 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 H0Y626 953 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TOM1L1O75674 476 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TRIM16O95361 564 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 RANBP1P43487 201 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PCYT1AP49585 367 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DPCR1Q3MIW9 517 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 KAZNQ674X7 775 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 NUGGCQ68CJ6 796 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DPY19L2Q6NUT2 758 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TMEM179Q6ZVK1 233 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 EPM2AIP1Q7L775 607 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 FRMD5Q7Z6J6 570 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 THEM5Q8N1Q8 247 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 LZICQ8WZA0 190 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 SNF8Q96H20 258 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PDLIM2Q96JY6 352 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 FGD4Q96M96 766 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TSSK1BQ9BXA7 367 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 SMARCAL1Q9NZC9 954 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 UVRAGQ9P2Y5 699 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 SERPINB13Q9UIV8 391 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PLAAQ9Y263 795 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DYTNA2CJ06 578 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 UBAP1LF5GYI3 381 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 MYO1CO00159 1063 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PIK3R2O00459 728 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PMS2P54278 862 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 NLRP11P59045 1033 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 BASP1P80723 227 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 OCRLQ01968 901 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CAPRIN1Q14444 709 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ZNF667Q5HYK9 610 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 DAB2IPQ5VWQ8 1189 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 RHOT1Q8IXI2 618 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TBC1D19Q8N5T2 526 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CCDC127Q96BQ5 260 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TSPAN17Q96FV3 270 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 BEGAINQ9BUH8 593 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 C10orf88Q9H8K7 445 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 CDHR2Q9BYE9 1310 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 P4HA2O15460 535 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ATP5BP06576 529 aaKnown RBP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 PMLP29590 882 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ARFIP2P53365 341 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 EFTUD2Q15029 972 aaKnown RBP eCLIP6.51□□□□□ -1.37
SCN1A-203ENST00000409050 NECTIN1Q15223 517 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 KRT31Q15323 416 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 FAM47AQ5JRC9 791 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 METTL13Q8N6R0 699 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 XXYLT1Q8NBI6 393 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 TBCKQ8TEA7 893 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 NDEL1Q9GZM8 345 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ING2Q9H160 280 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 EHD2Q9NZN4 543 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 INTUQ9ULD6 942 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 ARL2BPQ9Y2Y0 163 aa6.51□□□□□ -1.37
SCN1A-203ENST00000409050 SYCE1LA8MT33 242 aa6.5□□□□□ -1.37
SCN1A-203ENST00000409050 KLHL2O95198 593 aa6.5□□□□□ -1.37
SCN1A-203ENST00000409050 CYP21A2P08686 494 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms