RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CXCL10P02778 98 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 SPATA31C1P0DKV0 1188 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 CDC25AP30304 524 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 PRPHP41219 470 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 BECN1Q14457 450 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 LPIN1Q14693 890 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 EMC2Q15006 297 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 FAM26DQ5JW98 314 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 FBXO47Q5MNV8 452 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 IER5Q5VY09 327 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 DTHD1Q6ZMT9 781 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 KIAA0319LQ8IZA0 1049 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 LINC01465Q8N7H1 131 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 DBF4BQ8NFT6 615 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 HERVK_113Q902F9 699 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 CEP89Q96ST8 783 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 NIFKQ9BYG3 293 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 IFIH1Q9BYX4 1025 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 MTIF3Q9H2K0 278 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 MAGEB2O15479 319 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 PARNO95453 639 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 F13A1P00488 732 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 CD52P31358 61 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 KCNJ6P48051 423 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 WDR5P61964 334 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 DEFB103AP81534 67 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 GRIN1Q05586 938 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 PAK2Q13177 524 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 ECM1Q16610 540 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 PLEKHG4Q58EX7 1191 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 RPAINQ86UA6 219 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 TMEM40Q8WWA1 233 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 SEPT8Q92599 483 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 USP28Q96RU2 1077 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 CDHR5Q9HBB8 845 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 SLC4A7Q9Y6M7 1214 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 TTC3P53804 2025 aa11.48□□□□□ -0.57
TSPAN9-202ENST00000407263 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 BAIAP3O94812 1187 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RPA1P27694 616 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 TMOD1P28289 359 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 MARCKSP29966 332 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 PBX2P40425 430 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RFC5P40937 340 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RARRES1P49788 294 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 GPC3P51654 580 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RABGGTBP53611 331 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 LRIT3Q3SXY7 679 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RASIP1Q5U651 963 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 FAM117BQ6P1L5 589 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 KSR1Q8IVT5 923 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 NLRP4Q96MN2 994 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 PLIN2Q99541 437 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 MTRQ99707 1265 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 ZSCAN16Q9H4T2 348 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 AGO3Q9H9G7 860 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 ATP6V0A4Q9HBG4 840 aa11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 DDX19AQ9NUU7 478 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 TDRD15B5MCY1 1934 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-202ENST00000407263 LAMA3Q16787 3333 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 ARHGEF35A5YM69 484 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 GPR32O75388 356 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 LYPLA2O95372 231 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 BMP15O95972 392 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 ATP2A2P16615 1042 aaKnown RBP11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 FGFR4P22455 802 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 NFX1Q12986 1120 aaKnown RBP11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 PTPAQ15257 358 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 KRT79Q5XKE5 535 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 MAEAQ7L5Y9 396 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 FAM228AQ86W67 206 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 NME8Q8N427 588 aa11.46□□□□□ -0.57
TSPAN9-202ENST00000407263 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms