RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 DAW1Q8N136 415 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 TIPINQ9BVW5 301 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.7■■□□□ 1.223e-11■□□□□ 9.9
CHKB-201ENST00000406938 DNAJC25Q9H1X3 360 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 DHX33Q9H6R0 707 aaKnown RBP22.7■■□□□ 1.22
CHKB-201ENST00000406938 XPNPEP1Q9NQW7 623 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 GDAQ9Y2T3 454 aa22.7■■□□□ 1.22
CHKB-201ENST00000406938 FAM13AO94988 1023 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 CST5P28325 142 aaPredicted RBP22.69■■□□□ 1.22
CHKB-201ENST00000406938 ZNF131P52739 623 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 KIAA0753Q2KHM9 967 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 ZNF658Q5TYW1 1059 aaPredicted RBP22.69■■□□□ 1.22
CHKB-201ENST00000406938 GAS2L3Q86XJ1 694 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 SFR1Q86XK3 245 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 MCPH1Q8NEM0 835 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 TRAPPC12Q8WVT3 735 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 SLC7A3Q8WY07 619 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 GPRC5CQ9NQ84 441 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 PDLIM7Q9NR12 457 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 COL4A3BPQ9Y5P4 624 aa22.69■■□□□ 1.22
CHKB-201ENST00000406938 SFI1A8K8P3 1242 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 ZEB2O60315 1214 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 KPNA6O60684 536 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 MYCNP04198 464 aaPredicted RBP22.68■■□□□ 1.22
CHKB-201ENST00000406938 INSRRP14616 1297 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 TBC1D8BQ0IIM8 1120 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 MFSD10Q14728 455 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 HERC4Q5GLZ8 1057 aaPredicted RBP22.68■■□□□ 1.22
CHKB-201ENST00000406938 FAM102BQ5T8I3 360 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 LHX8Q68G74 356 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 KLHDC9Q8NEP7 349 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 KATNAL1Q9BW62 490 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 UNC93B1Q9H1C4 597 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 PARVGQ9HBI0 331 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 GAP43P17677 238 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 PSEN2P49810 448 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 SOX10P56693 466 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 CHMP4BP1P59074 171 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 STK4Q13043 487 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 ZNF484Q5JVG2 852 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 FAM26FQ5R3K3 315 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 KIAA0895Q8NCT3 520 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 DRC1Q96MC2 740 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 SLC39A2Q9NP94 309 aa22.68■■□□□ 1.22
CHKB-201ENST00000406938 COL1A2P08123 1366 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 HAS3O00219 553 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 MAFO75444 373 aaPredicted RBP22.67■■□□□ 1.22
CHKB-201ENST00000406938 MYCP01106 439 aaPredicted RBP22.67■■□□□ 1.22
CHKB-201ENST00000406938 IGBP1P78318 339 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 PPFIA1Q13136 1202 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 CCSAPQ6IQ19 270 aaPredicted RBP22.67■■□□□ 1.22
CHKB-201ENST00000406938 FBXO46Q6PJ61 603 aaPredicted RBP22.67■■□□□ 1.22
CHKB-201ENST00000406938 CXCL17Q6UXB2 119 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 RNF180Q86T96 592 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 MYCT1Q8N699 235 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 MLKLQ8NB16 471 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 MTG1Q9BT17 334 aaPredicted RBP22.67■■□□□ 1.22
CHKB-201ENST00000406938 TBC1D7Q9P0N9 293 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 PCDHA2Q9Y5H9 948 aa22.67■■□□□ 1.22
CHKB-201ENST00000406938 FRMPD3Q5JV73 1810 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 PSMD2Q13200 908 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 MTFR1Q15390 333 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 GRIK4Q16099 956 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 KCNA10Q16322 511 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 KIFAP3Q92845 792 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 FGFBP2Q9BYJ0 223 aa22.66■■□□□ 1.22
CHKB-201ENST00000406938 C22orf31O95567 290 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 ASGR1P07306 291 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 SMIM10L2AP0DMW4 78 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 SMIM10L2BP0DMW5 78 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 CD44P16070 742 aaKnown RBP22.65■■□□□ 1.22
CHKB-201ENST00000406938 LRRC41Q15345 812 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 ODR4Q5SWX8 454 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 PCSK9Q8NBP7 692 aaKnown RBP22.65■■□□□ 1.22
CHKB-201ENST00000406938 GLIS3Q8NEA6 775 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 PPP1R13LQ8WUF5 828 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 TMEM143Q96AN5 459 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 ZBTB10Q96DT7 871 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 GTPBP4Q9BZE4 634 aaKnown RBP22.65■■□□□ 1.22
CHKB-201ENST00000406938 POLR3FQ9H1D9 316 aaPredicted RBP22.65■■□□□ 1.22
CHKB-201ENST00000406938 PAK6Q9NQU5 681 aaPredicted RBP22.65■■□□□ 1.22
CHKB-201ENST00000406938 OLFML3Q9NRN5 406 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 SEL1LQ9UBV2 794 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 BRCA2P51587 3418 aa22.65■■□□□ 1.22
CHKB-201ENST00000406938 PLS3P13797 630 aa22.64■■□□□ 1.22
CHKB-201ENST00000406938 EXOC8Q8IYI6 725 aa22.64■■□□□ 1.22
CHKB-201ENST00000406938 LARSQ9P2J5 1176 aaKnown RBP22.64■■□□□ 1.22
CHKB-201ENST00000406938 DACH1Q9UI36 760 aa22.64■■□□□ 1.22
CHKB-201ENST00000406938 MAPK8IP1Q9UQF2 711 aa22.64■■□□□ 1.22
CHKB-201ENST00000406938 IGKV6-21A0A0C4DH24 114 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 PPP1R3GB7ZBB8 358 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 CCL5P13501 91 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 PRCPP42785 496 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 PKN2Q16513 984 aaKnown RBP22.64■■□□□ 1.21
CHKB-201ENST00000406938 LMBR1Q8WVP7 490 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 FIZ1Q96SL8 496 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 JPH2Q9BR39 696 aaPredicted RBP22.64■■□□□ 1.21
CHKB-201ENST00000406938 MRPL44Q9H9J2 332 aaKnown RBP22.64■■□□□ 1.21
CHKB-201ENST00000406938 SETD4Q9NVD3 440 aa22.64■■□□□ 1.21
CHKB-201ENST00000406938 GAS2O43903 313 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms